RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 PRKG1Q13976 671 aa19.52■□□□□ 0.72
C11orf88-202ENST00000375618 OTUD7AQ8TE49 926 aaPredicted RBP19.52■□□□□ 0.72
C11orf88-202ENST00000375618 RFX7Q2KHR2 1363 aa19.52■□□□□ 0.72
C11orf88-202ENST00000375618 GPR75-ASB3A0A0A6YYF3 556 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 UBE2Q2LH0YL09 131 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 IGHDP01880 384 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 BTDP43251 543 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 RHBDL3P58872 404 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 TSHZ3Q63HK5 1081 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.51■□□□□ 0.71
C11orf88-202ENST00000375618 CAPNS2Q96L46 248 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 USP40Q9NVE5 1235 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 FAM198AQ9UFP1 575 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 DOCK2Q92608 1830 aa19.51■□□□□ 0.71
C11orf88-202ENST00000375618 ATP5JP18859 108 aa19.5■□□□□ 0.71
C11orf88-202ENST00000375618 AAMPQ13685 434 aa19.5■□□□□ 0.71
C11orf88-202ENST00000375618 HHIPL1Q96JK4 782 aa19.5■□□□□ 0.71
C11orf88-202ENST00000375618 BOLA2Q9H3K6 86 aa19.5■□□□□ 0.71
C11orf88-202ENST00000375618 WDR33Q9C0J8 1336 aaKnown RBP19.5■□□□□ 0.71
C11orf88-202ENST00000375618 FAM155AB1AL88 458 aaPredicted RBP19.49■□□□□ 0.71
C11orf88-202ENST00000375618 AOC2O75106 756 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 GRM1Q13255 1194 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 TNFAIP1Q13829 316 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 FKBP1CQ5VVH2 108 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 PAXIP1Q6ZW49 1069 aaPredicted RBP19.49■□□□□ 0.71
C11orf88-202ENST00000375618 ZIC5Q96T25 663 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
C11orf88-202ENST00000375618 DDX4Q9NQI0 724 aaKnown RBP19.49■□□□□ 0.71
C11orf88-202ENST00000375618 THSD7BQ9C0I4 1608 aa19.49■□□□□ 0.71
C11orf88-202ENST00000375618 GOLIM4O00461 696 aa19.48■□□□□ 0.71
C11orf88-202ENST00000375618 WDHD1O75717 1129 aaPredicted RBP19.48■□□□□ 0.71
C11orf88-202ENST00000375618 IDH1O75874 414 aaKnown RBP19.48■□□□□ 0.71
C11orf88-202ENST00000375618 FKBP1BP68106 108 aa19.48■□□□□ 0.71
C11orf88-202ENST00000375618 TCP10Q12799 353 aa19.48■□□□□ 0.71
C11orf88-202ENST00000375618 NAA16Q6N069 864 aaPredicted RBP19.48■□□□□ 0.71
C11orf88-202ENST00000375618 FAM83AQ86UY5 434 aa19.48■□□□□ 0.71
C11orf88-202ENST00000375618 TMOD2Q9NZR1 351 aa19.48■□□□□ 0.71
C11orf88-202ENST00000375618 USP2O75604 605 aaPredicted RBP19.47■□□□□ 0.71
C11orf88-202ENST00000375618 NF2P35240 595 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 TNNI2P48788 182 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 GSTO1P78417 241 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 TTLL12Q14166 644 aaPredicted RBP19.47■□□□□ 0.71
C11orf88-202ENST00000375618 RGMBQ6NW40 437 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 SLF2Q8IX21 1173 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 HAUS7Q99871 368 aa19.47■□□□□ 0.71
C11orf88-202ENST00000375618 ANGEL1Q9UNK9 670 aaKnown RBP19.47■□□□□ 0.71
C11orf88-202ENST00000375618 CHGBP05060 677 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 LDHCP07864 332 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 RGS3P49796 1198 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 SLFNL1Q499Z3 407 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 LDLRAD1Q5T700 205 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 SH3BP5LQ7L8J4 393 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 MAGEB6Q8N7X4 407 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 FAM151AQ8WW52 585 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 IDI2Q9BXS1 227 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 ECHDC1Q9NTX5 307 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 SALL3Q9BXA9 1300 aa19.46■□□□□ 0.71
C11orf88-202ENST00000375618 RPAP1Q9BWH6 1393 aaPredicted RBP19.45■□□□□ 0.7
C11orf88-202ENST00000375618 SLURP2P0DP57 97 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 CYP7A1P22680 504 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 DYNLL1P63167 89 aaKnown RBP19.45■□□□□ 0.7
C11orf88-202ENST00000375618 MAP3K11Q16584 847 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 SUPT20HL1Q3ZLR7 823 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 RASAL3Q86YV0 1011 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 SH3RF3Q8TEJ3 882 aaPredicted RBP19.45■□□□□ 0.7
C11orf88-202ENST00000375618 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 CLMNQ96JQ2 1002 aa19.45■□□□□ 0.7
C11orf88-202ENST00000375618 AATFQ9NY61 560 aaKnown RBP eCLIP19.45■□□□□ 0.7
C11orf88-202ENST00000375618 ECE1P42892 770 aa19.44■□□□□ 0.7
C11orf88-202ENST00000375618 ZNF157P51786 506 aaPredicted RBP19.44■□□□□ 0.7
C11orf88-202ENST00000375618 ARMC9Q7Z3E5 817 aa19.44■□□□□ 0.7
C11orf88-202ENST00000375618 PAG1Q9NWQ8 432 aa19.44■□□□□ 0.7
C11orf88-202ENST00000375618 OTOFQ9HC10 1997 aa19.44■□□□□ 0.7
C11orf88-202ENST00000375618 ATRNL1Q5VV63 1379 aa19.44■□□□□ 0.7
C11orf88-202ENST00000375618 SLC10A3P09131 477 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 PDE6AP16499 860 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 PPP4CP60510 307 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 PICALMQ13492 652 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 PI4K2BQ8TCG2 481 aa19.43■□□□□ 0.7
C11orf88-202ENST00000375618 RWDD1Q9H446 243 aaPredicted RBP19.43■□□□□ 0.7
C11orf88-202ENST00000375618 TCRBV5S4A2TA0A5A2 114 aa19.42■□□□□ 0.7
C11orf88-202ENST00000375618 DDTLA6NHG4 134 aaPredicted RBP19.42■□□□□ 0.7
C11orf88-202ENST00000375618 ENTPD3O75355 529 aa19.42■□□□□ 0.7
C11orf88-202ENST00000375618 MAP3K12Q12852 859 aa19.42■□□□□ 0.7
C11orf88-202ENST00000375618 TTF1Q15361 905 aaPredicted RBP19.42■□□□□ 0.7
C11orf88-202ENST00000375618 PPP1R12BO60237 982 aaPredicted RBP19.41■□□□□ 0.7
C11orf88-202ENST00000375618 IGSF3O75054 1194 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 B4GALNT3Q6L9W6 998 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 MIGA2Q7L4E1 593 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 TEX11Q8IYF3 940 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 LNPKQ9C0E8 428 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 CDK5RAP2Q96SN8 1893 aa19.41■□□□□ 0.7
C11orf88-202ENST00000375618 HSPA1AP0DMV8 641 aaKnown RBP19.4■□□□□ 0.7
C11orf88-202ENST00000375618 HSPA1BP0DMV9 641 aaKnown RBP19.4■□□□□ 0.7
C11orf88-202ENST00000375618 SLC9C2Q5TAH2 1124 aa19.4■□□□□ 0.7
C11orf88-202ENST00000375618 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms