RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 BBXQ8WY36 941 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-203ENST00000375274 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 DESP17661 470 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 CUL4AQ13619 759 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 ADALQ6DHV7 355 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 C6orf50Q9HD87 102 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
PTCH1-203ENST00000375274 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 KRT79Q5XKE5 535 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
PTCH1-203ENST00000375274 NAPGQ99747 312 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-203ENST00000375274 DNAJC21Q5F1R6 531 aaKnown RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 TRMT1LQ7Z2T5 733 aaKnown RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 DZIP3Q86Y13 1208 aaKnown RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 XAGE2Q96GT9 111 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 ZNF594Q96JF6 807 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NIP7Q9Y221 180 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 PLXNC1O60486 1568 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 GSTO1P78417 241 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 TBC1D8BQ0IIM8 1120 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 UNC5CLQ8IV45 518 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NEK11Q8NG66 645 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 ZNF215Q9UL58 517 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 E7EWF7 191 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 ZEB2O60315 1214 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 TUBB2AQ13885 445 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-203ENST00000375274 ARFGAP2Q8N6H7 521 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 PHKBQ93100 1093 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 PLIN2Q99541 437 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 TUBB2BQ9BVA1 445 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 SIRT2Q8IXJ6 389 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 CCDC155Q8N6L0 562 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 NLRP3Q96P20 1036 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 DSCC1Q9BVC3 393 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 MCM9Q9NXL9 1143 aa13.03□□□□□ -0.32
PTCH1-203ENST00000375274 HLA-DOAP06340 250 aa13.02□□□□□ -0.32
PTCH1-203ENST00000375274 GTF2A1P52655 376 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-203ENST00000375274 UBE4AQ14139 1066 aa13.02□□□□□ -0.32
PTCH1-203ENST00000375274 OTUD6BQ8N6M0 293 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 FAM76AQ8TAV0 307 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 RASSF4Q9H2L5 321 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 IL2RBP14784 551 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 TRIM14Q14142 442 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
PTCH1-203ENST00000375274 GNA11P29992 359 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 KRT9P35527 623 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
PTCH1-203ENST00000375274 MTX1Q13505 466 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 LSG1Q9H089 658 aaKnown RBP13.01□□□□□ -0.33
PTCH1-203ENST00000375274 EHMT1Q9H9B1 1298 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 MAPK8IP1Q9UQF2 711 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 ERCC6LQ2NKX8 1250 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 ADCK5Q3MIX3 580 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 MYL10Q9BUA6 226 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 PYCARDQ9ULZ3 195 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 CTNND2Q9UQB3 1225 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 ATP10AO60312 1499 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 CTNNA2P26232 953 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 POSTNQ15063 836 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 BEND3Q5T5X7 828 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 TICAM2Q86XR7 235 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 TMTC1Q8IUR5 882 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 TBC1D5Q92609 795 aa13.01□□□□□ -0.33
PTCH1-203ENST00000375274 ZNF274Q96GC6 653 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-203ENST00000375274 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-203ENST00000375274 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
PTCH1-203ENST00000375274 SYNMO15061 1565 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 ETF1P62495 437 aaKnown RBP13□□□□□ -0.33
PTCH1-203ENST00000375274 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 V9GY48 417 aaPredicted RBP13□□□□□ -0.33
PTCH1-203ENST00000375274 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 CEP170Q5SW79 1584 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 ITGA6P23229 1130 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 LRRC8AQ8IWT6 810 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 LMBR1Q8WVP7 490 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 GIGYF1O75420 1035 aaPredicted RBP13□□□□□ -0.33
PTCH1-203ENST00000375274 TNNI2P48788 182 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 MAP4K1Q92918 833 aa13□□□□□ -0.33
PTCH1-203ENST00000375274 SEC62Q99442 399 aaKnown RBP13□□□□□ -0.33
PTCH1-203ENST00000375274 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
PTCH1-203ENST00000375274 TTC31Q49AM3 519 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms