RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
UBR4-202ENST00000375224 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.886e-6■□□□□ 8.9
UBR4-202ENST00000375224 VPS37DQ86XT2 251 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 DDX19AQ9NUU7 478 aaKnown RBP9.58□□□□□ -0.88
UBR4-202ENST00000375224 ANTXR2P58335 489 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 MTA3Q9BTC8 594 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 KCNG1Q9UIX4 513 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 DTNBO60941 627 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 HMGB2P26583 209 aaKnown RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 TNNT3P45378 269 aaPredicted RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 GJD4Q96KN9 370 aaPredicted RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 RNF41Q9H4P4 317 aaPredicted RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 MINPP1Q9UNW1 487 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 RPS8P62241 208 aaKnown RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 PDLIM2Q96JY6 352 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 SH2B2O14492 632 aaPredicted RBP9.57□□□□□ -0.88
UBR4-202ENST00000375224 IGSF3O75054 1194 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 TBC1D10CQ8IV04 446 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 ARMT1Q9H993 441 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
UBR4-202ENST00000375224 PDS5AQ29RF7 1337 aaKnown RBP9.56□□□□□ -0.88
UBR4-202ENST00000375224 A0A1B0GUL6 1792 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 MYH15Q9Y2K3 1946 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 LY75O60449 1722 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 CCDC66A2RUB6 948 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 SNAP23O00161 211 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 LIFRP42702 1097 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 TDO2P48775 406 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 SART3Q15020 963 aaKnown RBP9.56□□□□□ -0.88
UBR4-202ENST00000375224 AKNAD1Q5T1N1 836 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 FAM173BQ6P4H8 233 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 MFSD6Q6ZSS7 791 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 C8orf76Q96K31 380 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 CASZ1Q86V15 1759 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 GSG1L2A8MUP6 293 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
UBR4-202ENST00000375224 CCDC192P0DO97 292 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 CYP7A1P22680 504 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 TRAPPC3LQ5T215 181 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 SYNE3Q6ZMZ3 975 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 NBPF3Q9H094 633 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 ORC3Q9UBD5 711 aaPredicted RBP9.56□□□□□ -0.88
UBR4-202ENST00000375224 RCOR1Q9UKL0 485 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 CHD4Q14839 1912 aa9.56□□□□□ -0.88
UBR4-202ENST00000375224 ONECUT3O60422 494 aaPredicted RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 ADRA2BP18089 450 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 RFC4P35249 363 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 METAP2P50579 478 aaKnown RBP eCLIP9.55□□□□□ -0.885e-7■■□□□ 11.5
UBR4-202ENST00000375224 BRAPQ7Z569 592 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 SGMS1Q86VZ5 419 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 TMTC2Q8N394 836 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 RAI14Q9P0K7 980 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 TRPC5Q9UL62 973 aaPredicted RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 TIAM2Q8IVF5 1701 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 TAF1LQ8IZX4 1826 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 B4E1Z4 1266 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 KCNQ4P56696 695 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 TPRNQ4KMQ1 711 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 NFXL1Q6ZNB6 911 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 RNF214Q8ND24 703 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 STAG1Q8WVM7 1258 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 ARHGEF1Q92888 912 aaKnown RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 SRP68Q9UHB9 627 aaKnown RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 MAGEB6P1A0A0J9YX57 407 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 NPHP1O15259 732 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 FDPSP14324 419 aaKnown RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 CYB5R4Q7L1T6 521 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 FBXO33Q7Z6M2 555 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 CELF1Q92879 486 aaKnown RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 EPB41L4AQ9HCS5 686 aaPredicted RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 GPHNQ9NQX3 736 aaPredicted RBP9.55□□□□□ -0.88
UBR4-202ENST00000375224 ABCF2Q9UG63 623 aa9.55□□□□□ -0.88
UBR4-202ENST00000375224 ERICH2A1L162 156 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 ZBTB43O43298 467 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 GYG1P46976 350 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 LCORLQ8N3X6 602 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 FBXO18Q8NFZ0 1043 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 FAM84BQ96KN1 310 aaPredicted RBP9.54□□□□□ -0.88
UBR4-202ENST00000375224 TNMDQ9H2S6 317 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 SBF2Q86WG5 1849 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 IFIT3O14879 490 aaKnown RBP9.54□□□□□ -0.88
UBR4-202ENST00000375224 GIMAP6Q6P9H5 292 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 APOA5Q6Q788 366 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 PTF1AQ7RTS3 328 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 IGDCC4Q8TDY8 1250 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 NEDD4P46934 1319 aa9.54□□□□□ -0.88
UBR4-202ENST00000375224 CTAGE5O15320 804 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms