RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 LEO1Q8WVC0 666 aaPredicted RBP22.2■■□□□ 1.14
COL15A1-201ENST00000375001 STK38LQ9Y2H1 464 aa22.2■■□□□ 1.14
COL15A1-201ENST00000375001 SND1Q7KZF4 910 aaKnown RBP eCLIP22.19■■□□□ 1.14
COL15A1-201ENST00000375001 GPR161Q8N6U8 529 aaKnown RBP22.19■■□□□ 1.14
COL15A1-201ENST00000375001 EPSTI1Q96J88 318 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 KRT23Q9C075 422 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 TTC41PQ6P2S7 1318 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 RAPGEF1Q13905 1077 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 VPS52Q8N1B4 723 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 RABGAP1Q9Y3P9 1069 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 ERCC5P28715 1186 aaPredicted RBP22.19■■□□□ 1.14
COL15A1-201ENST00000375001 MRPS9P82933 396 aaKnown RBP22.19■■□□□ 1.14
COL15A1-201ENST00000375001 IFIT1BQ5T764 474 aaKnown RBP22.19■■□□□ 1.14
COL15A1-201ENST00000375001 GDAP1L1Q96MZ0 367 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 KDM5BQ9UGL1 1544 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 ALDH1L1O75891 902 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 TRIM68Q6AZZ1 485 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 PHLDB2Q86SQ0 1253 aa22.19■■□□□ 1.14
COL15A1-201ENST00000375001 PTPDC1A2A3K4 754 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 CCDC62Q6P9F0 684 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 CEP128Q6ZU80 1094 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 ACTN4O43707 911 aaKnown RBP22.18■■□□□ 1.14
COL15A1-201ENST00000375001 KSR2Q6VAB6 950 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 VPS16Q9H269 839 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 SNRPA1P09661 255 aaKnown RBP22.18■■□□□ 1.14
COL15A1-201ENST00000375001 SUDS3Q9H7L9 328 aaPredicted RBP22.18■■□□□ 1.14
COL15A1-201ENST00000375001 WDR78Q5VTH9 848 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 LMBR1LQ6UX01 489 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 CERS3Q8IU89 383 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 TMTC2Q8N394 836 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.18■■□□□ 1.14
COL15A1-201ENST00000375001 ZMYM4Q5VZL5 1548 aa22.18■■□□□ 1.14
COL15A1-201ENST00000375001 IFNL2Q8IZJ0 200 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 DDX27Q96GQ7 796 aaKnown RBP22.17■■□□□ 1.14
COL15A1-201ENST00000375001 MSH6P52701 1360 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 LIG3P49916 1009 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 PLIN2Q99541 437 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 DDX21Q9NR30 783 aaKnown RBP eCLIP22.17■■□□□ 1.14
COL15A1-201ENST00000375001 FANCAO15360 1455 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 ZNF445P59923 1031 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 LONRF3Q496Y0 759 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 CBX8Q9HC52 389 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 UTP11Q9Y3A2 253 aaKnown RBP22.17■■□□□ 1.14
COL15A1-201ENST00000375001 RIPOR2Q9Y4F9 1068 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 SBNO2Q9Y2G9 1366 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 FANCCQ00597 558 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 SLC39A6Q13433 755 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 CYP26C1Q6V0L0 522 aa22.17■■□□□ 1.14
COL15A1-201ENST00000375001 PPANQ9NQ55 473 aaKnown RBP22.17■■□□□ 1.14
COL15A1-201ENST00000375001 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
COL15A1-201ENST00000375001 MAP7Q14244 749 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 ARHGAP24Q8N264 748 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 SOS1Q07889 1333 aaPredicted RBP22.16■■□□□ 1.14
COL15A1-201ENST00000375001 GSDMBQ8TAX9 411 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 ZNF652Q9Y2D9 606 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 CETN3O15182 167 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 CWF19L2Q2TBE0 894 aaKnown RBP22.16■■□□□ 1.14
COL15A1-201ENST00000375001 ZNF365Q70YC5 407 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 ODF2LQ9ULJ1 636 aa22.16■■□□□ 1.14
COL15A1-201ENST00000375001 DTNBO60941 627 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 TBC1D8BQ0IIM8 1120 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 ESR2Q92731 530 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 TPX2Q9ULW0 747 aaKnown RBP22.15■■□□□ 1.14
COL15A1-201ENST00000375001 MUM1Q2TAK8 710 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 FAM173BQ6P4H8 233 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
COL15A1-201ENST00000375001 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 PSMB7Q99436 277 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 BICRAQ9NZM4 1560 aa22.15■■□□□ 1.14
COL15A1-201ENST00000375001 G2E3Q7L622 706 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 TAOK1Q7L7X3 1001 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 BRAPQ7Z569 592 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 FRMD3A2A2Y4 597 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 LMBRD1Q9NUN5 540 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 CTNND2Q9UQB3 1225 aa22.14■■□□□ 1.14
COL15A1-201ENST00000375001 COL17A1Q9UMD9 1497 aaPredicted RBP22.14■■□□□ 1.13
COL15A1-201ENST00000375001 ELP1O95163 1332 aa22.14■■□□□ 1.13
COL15A1-201ENST00000375001 FAM13AO94988 1023 aa22.14■■□□□ 1.13
COL15A1-201ENST00000375001 GNGT1P63211 74 aa22.14■■□□□ 1.13
COL15A1-201ENST00000375001 KLHL7Q8IXQ5 586 aa22.14■■□□□ 1.13
COL15A1-201ENST00000375001 IQUBQ8NA54 791 aa22.14■■□□□ 1.13
COL15A1-201ENST00000375001 NOC4LQ9BVI4 516 aaKnown RBP22.14■■□□□ 1.13
COL15A1-201ENST00000375001 KRT79Q5XKE5 535 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 DPH6Q7L8W6 267 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 TCHPQ9BT92 498 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 IMPG2Q9BZV3 1241 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 CNNM2Q9H8M5 875 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 PAG1Q9NWQ8 432 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 GADD45BO75293 160 aaPredicted RBP22.13■■□□□ 1.13
COL15A1-201ENST00000375001 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
COL15A1-201ENST00000375001 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.13■■□□□ 1.13
COL15A1-201ENST00000375001 NAPAP54920 295 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 HHATQ5VTY9 493 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 SECISBP2LQ93073 1101 aaKnown RBP22.13■■□□□ 1.13
COL15A1-201ENST00000375001 SPOPO43791 374 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 PAK2Q13177 524 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 SLF2Q8IX21 1173 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 TACC3Q9Y6A5 838 aa22.13■■□□□ 1.13
COL15A1-201ENST00000375001 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms