RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 AGBL3Q8NEM8 1001 aa20.58■□□□□ 0.89
HLA-DMA-201ENST00000374843 EPB41L4AQ9HCS5 686 aaPredicted RBP20.58■□□□□ 0.89
HLA-DMA-201ENST00000374843 AATFQ9NY61 560 aaKnown RBP eCLIP20.58■□□□□ 0.89
HLA-DMA-201ENST00000374843 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.89
HLA-DMA-201ENST00000374843 SERPINA10Q9UK55 444 aa20.58■□□□□ 0.89
HLA-DMA-201ENST00000374843 GSG1L2A8MUP6 293 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 SLC27A2O14975 620 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 PLCG2P16885 1265 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 BTDP43251 543 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 TSGA10IPQ3SY00 556 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 RNF20Q5VTR2 975 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 TEKT1Q969V4 418 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 ZDHHC15Q96MV8 337 aa20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 NOL10Q9BSC4 688 aaKnown RBP20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
HLA-DMA-201ENST00000374843 FOCADQ5VW36 1801 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 MMP14P50281 582 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 TNIP1Q15025 636 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 KIAA0825Q8IV33 1275 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 RASEFQ8IZ41 740 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 SNX14Q9Y5W7 946 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 SLC4A4Q9Y6R1 1079 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 SRCAPQ6ZRS2 3230 aa20.56■□□□□ 0.88
HLA-DMA-201ENST00000374843 F8W031 263 aaPredicted RBP20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 PRKAB2O43741 272 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 FGAP02671 866 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 RPS12P25398 132 aaKnown RBP20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 CRKP46108 304 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 RHBDL3P58872 404 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 NACAP1Q9BZK3 213 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 NAV1Q8NEY1 1877 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 CDK5RAP2Q96SN8 1893 aa20.55■□□□□ 0.88
HLA-DMA-201ENST00000374843 LAMB1P07942 1786 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 CYP21A2P08686 494 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 RABEP1Q15276 862 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 IFNL3Q8IZI9 196 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 ATP8A2Q9NTI2 1148 aa20.54■□□□□ 0.88
HLA-DMA-201ENST00000374843 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 SCNN1DP51172 638 aa20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 EIF6P56537 245 aaKnown RBP20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 APOBEC3HQ6NTF7 200 aaKnown RBP20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 SH3RF3Q8TEJ3 882 aaPredicted RBP20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 MKRN1Q9UHC7 482 aaKnown RBP20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 ZNF541Q9H0D2 1346 aa20.53■□□□□ 0.88
HLA-DMA-201ENST00000374843 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 KRT32Q14532 448 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 IMMTQ16891 758 aaKnown RBP20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 SDR42E1Q8WUS8 393 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 NAPBQ9H115 298 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 DCP1AQ9NPI6 582 aaPredicted RBP20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 HDAC9Q9UKV0 1011 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 ECM29Q5VYK3 1845 aa20.52■□□□□ 0.88
HLA-DMA-201ENST00000374843 GRIN3BO60391 1043 aa20.51■□□□□ 0.87
HLA-DMA-201ENST00000374843 APPP05067 770 aa20.51■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZNF280AP59817 542 aaPredicted RBP20.51■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZBTB12Q9Y330 459 aaPredicted RBP20.51■□□□□ 0.87
HLA-DMA-201ENST00000374843 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
HLA-DMA-201ENST00000374843 USP17L8P0C7I0 530 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 TDO2P48775 406 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 TEX11Q8IYF3 940 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 DPF2Q92785 391 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 NBPF3Q9H094 633 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 ANAPC4Q9UJX5 808 aa20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZC3H4Q9UPT8 1303 aaKnown RBP20.5■□□□□ 0.87
HLA-DMA-201ENST00000374843 SBK1Q52WX2 424 aa20.49■□□□□ 0.87
HLA-DMA-201ENST00000374843 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZBED3Q96IU2 234 aaPredicted RBP20.49■□□□□ 0.87
HLA-DMA-201ENST00000374843 ARPP21Q9UBL0 812 aaPredicted RBP20.49■□□□□ 0.87
HLA-DMA-201ENST00000374843 FLT1P17948 1338 aa20.49■□□□□ 0.87
HLA-DMA-201ENST00000374843 ROBO3Q96MS0 1386 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 SPDYE2BA6NHP3 402 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZNF213O14771 459 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 NPM3O75607 178 aaKnown RBP20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 WDHD1O75717 1129 aaPredicted RBP20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 SPDYE6P0CI01 402 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 GPR162Q16538 588 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 CFAP100Q494V2 611 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 CDC42EP5Q6NZY7 148 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 STOX1Q6ZVD7 989 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 OGFOD1Q8N543 542 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 RNF181Q9P0P0 153 aa20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 COL2A1P02458 1487 aaPredicted RBP20.48■□□□□ 0.87
HLA-DMA-201ENST00000374843 BAZ2AQ9UIF9 1905 aaKnown RBP20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 PSMA5P28066 241 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 USP5P45974 858 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 GMPSP49915 693 aaPredicted RBP20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 ADCK5Q3MIX3 580 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 TBC1D10CQ8IV04 446 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 GPC2Q8N158 579 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 JAKMIP1Q96N16 626 aaKnown RBP20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
HLA-DMA-201ENST00000374843 E7EWF7 191 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 HAND2P61296 217 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 PPARAQ07869 468 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
HLA-DMA-201ENST00000374843 CTR9Q6PD62 1173 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms