RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 FBXW7Q969H0 707 aa21.12■□□□□ 0.97
PFDN6-201ENST00000374606 LRP2BPQ9P2M1 347 aa21.12■□□□□ 0.97
PFDN6-201ENST00000374606 ZBTB12Q9Y330 459 aaPredicted RBP21.12■□□□□ 0.97
PFDN6-201ENST00000374606 ZNF646O15015 1829 aaPredicted RBP21.12■□□□□ 0.97
PFDN6-201ENST00000374606 SCN9AQ15858 1988 aa21.12■□□□□ 0.97
PFDN6-201ENST00000374606 FAM155AB1AL88 458 aaPredicted RBP21.11■□□□□ 0.97
PFDN6-201ENST00000374606 PSMD14O00487 310 aa21.11■□□□□ 0.97
PFDN6-201ENST00000374606 GTF2IP78347 998 aa21.11■□□□□ 0.97
PFDN6-201ENST00000374606 SPTY2D1Q68D10 685 aaPredicted RBP21.11■□□□□ 0.97
PFDN6-201ENST00000374606 C2orf69Q8N8R5 385 aa21.11■□□□□ 0.97
PFDN6-201ENST00000374606 CCDC102AQ96A19 550 aa21.11■□□□□ 0.97
PFDN6-201ENST00000374606 RAI14Q9P0K7 980 aa21.11■□□□□ 0.97
PFDN6-201ENST00000374606 NMIQ13287 307 aaPredicted RBP21.1■□□□□ 0.97
PFDN6-201ENST00000374606 TBC1D10BQ4KMP7 808 aaPredicted RBP21.1■□□□□ 0.97
PFDN6-201ENST00000374606 DLK2Q6UY11 383 aa21.1■□□□□ 0.97
PFDN6-201ENST00000374606 ERICH6Q7L0X2 663 aa21.1■□□□□ 0.97
PFDN6-201ENST00000374606 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
PFDN6-201ENST00000374606 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
PFDN6-201ENST00000374606 RAD50Q92878 1312 aa21.09■□□□□ 0.97
PFDN6-201ENST00000374606 POLR2AP24928 1970 aaKnown RBP21.09■□□□□ 0.97
PFDN6-201ENST00000374606 RNF113AO15541 343 aaKnown RBP21.09■□□□□ 0.97
PFDN6-201ENST00000374606 RPS12P25398 132 aaKnown RBP21.09■□□□□ 0.97
PFDN6-201ENST00000374606 MFSD14BQ5SR56 506 aa21.09■□□□□ 0.97
PFDN6-201ENST00000374606 SLC9C2Q5TAH2 1124 aa21.09■□□□□ 0.97
PFDN6-201ENST00000374606 CWC27Q6UX04 472 aaKnown RBP21.09■□□□□ 0.97
PFDN6-201ENST00000374606 DCPSQ96C86 337 aaKnown RBP21.09■□□□□ 0.97
PFDN6-201ENST00000374606 TNRC18O15417 2968 aaPredicted RBP21.08■□□□□ 0.97
PFDN6-201ENST00000374606 EIF5BO60841 1220 aaKnown RBP21.08■□□□□ 0.97
PFDN6-201ENST00000374606 IGSF3O75054 1194 aa21.08■□□□□ 0.97
PFDN6-201ENST00000374606 LDHBP07195 334 aaKnown RBP21.08■□□□□ 0.97
PFDN6-201ENST00000374606 PDE6AP16499 860 aa21.08■□□□□ 0.97
PFDN6-201ENST00000374606 ADD2P35612 726 aa21.08■□□□□ 0.97
PFDN6-201ENST00000374606 ZNF157P51786 506 aaPredicted RBP21.08■□□□□ 0.97
PFDN6-201ENST00000374606 KIF23Q02241 960 aaPredicted RBP21.08■□□□□ 0.97
PFDN6-201ENST00000374606 TTLL5Q6EMB2 1281 aa21.08■□□□□ 0.97
PFDN6-201ENST00000374606 ESYT1Q9BSJ8 1104 aa21.08■□□□□ 0.97
PFDN6-201ENST00000374606 A0A0D9SFI3 127 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 USP17L3A6NCW0 530 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 USP17L4A6NCW7 530 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 ADM5C9JUS6 153 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 PRDX5P30044 214 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 SOX10P56693 466 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 STRIP1Q5VSL9 837 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 USP17L1Q7RTZ2 530 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 DZIP1Q86YF9 867 aaKnown RBP21.07■□□□□ 0.96
PFDN6-201ENST00000374606 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 APPBP2Q92624 585 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 FAM227BQ96M60 508 aa21.07■□□□□ 0.96
PFDN6-201ENST00000374606 ZNF532Q9HCE3 1301 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 EGFRP00533 1210 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 CHGBP05060 677 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 UBE3CQ15386 1083 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 ZMYM1Q5SVZ6 1142 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 RBM26Q5T8P6 1007 aaKnown RBP21.06■□□□□ 0.96
PFDN6-201ENST00000374606 RNF186Q9NXI6 227 aa21.06■□□□□ 0.96
PFDN6-201ENST00000374606 TRPA1O75762 1119 aa21.05■□□□□ 0.96
PFDN6-201ENST00000374606 FKBP1AP62942 108 aaKnown RBP21.05■□□□□ 0.96
PFDN6-201ENST00000374606 DACT2Q5SW24 774 aa21.05■□□□□ 0.96
PFDN6-201ENST00000374606 NAA16Q6N069 864 aaPredicted RBP21.05■□□□□ 0.96
PFDN6-201ENST00000374606 TMED8Q6PL24 325 aaPredicted RBP21.05■□□□□ 0.96
PFDN6-201ENST00000374606 KCNQ5Q9NR82 932 aa21.05■□□□□ 0.96
PFDN6-201ENST00000374606 HELLSQ9NRZ9 838 aa21.05■□□□□ 0.96
PFDN6-201ENST00000374606 SUGT1Q9Y2Z0 365 aa21.05■□□□□ 0.96
PFDN6-201ENST00000374606 SGSM2O43147 1006 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 SLC10A3P09131 477 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 MFAP1P55081 439 aaKnown RBP21.04■□□□□ 0.96
PFDN6-201ENST00000374606 MECOMQ03112 1051 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 KIF4BQ2VIQ3 1234 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 SLFNL1Q499Z3 407 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 SULF1Q8IWU6 871 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 MAST3O60307 1309 aa21.04■□□□□ 0.96
PFDN6-201ENST00000374606 TCRBV5S4A2TA0A5A2 114 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 REC8O95072 547 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 CYP7A1P22680 504 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 GSTO1P78417 241 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 GRIK5Q16478 980 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 MCMDC2Q4G0Z9 681 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 CERS5Q8N5B7 392 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 NSUN4Q96CB9 384 aaKnown RBP21.03■□□□□ 0.96
PFDN6-201ENST00000374606 IL25Q9H293 177 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 GGA3Q9NZ52 723 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 MYO3BQ8WXR4 1341 aa21.03■□□□□ 0.96
PFDN6-201ENST00000374606 CTU1Q7Z7A3 348 aaKnown RBP21.02■□□□□ 0.96
PFDN6-201ENST00000374606 SEC62Q99442 399 aaKnown RBP21.02■□□□□ 0.96
PFDN6-201ENST00000374606 MXD3Q9BW11 206 aa21.02■□□□□ 0.96
PFDN6-201ENST00000374606 MYH2Q9UKX2 1941 aa21.02■□□□□ 0.95
PFDN6-201ENST00000374606 M0R2C6 588 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 SEC24BO95487 1268 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 REM2Q8IYK8 340 aaPredicted RBP21.01■□□□□ 0.95
PFDN6-201ENST00000374606 OSBP2Q969R2 916 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 CSRNP1Q96S65 589 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 UPF2Q9HAU5 1272 aaKnown RBP21.01■□□□□ 0.95
PFDN6-201ENST00000374606 ANO2Q9NQ90 1003 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 CCDC171Q6TFL3 1326 aa21.01■□□□□ 0.95
PFDN6-201ENST00000374606 F8W031 263 aaPredicted RBP21■□□□□ 0.95
PFDN6-201ENST00000374606 KIAA1211Q6ZU35 1233 aa21■□□□□ 0.95
PFDN6-201ENST00000374606 ZNF589Q86UQ0 364 aaPredicted RBP21■□□□□ 0.95
PFDN6-201ENST00000374606 SLF2Q8IX21 1173 aa21■□□□□ 0.95
PFDN6-201ENST00000374606 ZNF384Q8TF68 577 aa21■□□□□ 0.95
PFDN6-201ENST00000374606 PUS7LQ9H0K6 701 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms