RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 RNF41Q9H4P4 317 aaPredicted RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 GTF2A1P52655 376 aaPredicted RBP7.14□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC6Q16204 474 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 AOC3Q16853 763 aa7.14□□□□□ -1.27
PTPN3-202ENST00000374541 PTPDC1A2A3K4 754 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 BMP15O95972 392 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 MAATS1Q7Z4T9 603 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC117Q8IWD4 279 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 SAP30BPQ9UHR5 308 aaKnown RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 ABCC11Q96J66 1382 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 KIF13AQ9H1H9 1805 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 FRMPD1Q5SYB0 1578 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 BLMP54132 1417 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 USP17L3A6NCW0 530 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 USP17L4A6NCW7 530 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 TRPA1O75762 1119 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 LMAN1P49257 510 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 ILDR2Q71H61 639 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 USP17L1Q7RTZ2 530 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 CTAGE1Q96RT6 745 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 KAT14Q9H8E8 782 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 USP40Q9NVE5 1235 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 ANAPC4Q9UJX5 808 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 DENND2AQ9ULE3 1009 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 METP08581 1390 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 VWDEQ8N2E2 1590 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 COL17A1Q9UMD9 1497 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 IGFBP4P22692 258 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 ABI1Q8IZP0 508 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 SMC6Q96SB8 1091 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 SYT17Q9BSW7 474 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 TTC12Q9H892 705 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 SNRKQ9NRH2 765 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 RMND1Q9NWS8 449 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 PLA2R1Q13018 1463 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 TDRD12Q587J7 1177 aaKnown RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 CTCFLQ8NI51 663 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 CCDC110Q8TBZ0 833 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 KIF1BPQ96EK5 621 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 MADDQ8WXG6 1647 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 KCNJ6P48051 423 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 GPATCH11Q8N954 259 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 C8orf76Q96K31 380 aa7.13□□□□□ -1.27
PTPN3-202ENST00000374541 FAM193BQ96PV7 902 aaPredicted RBP7.13□□□□□ -1.27
PTPN3-202ENST00000374541 PI4KAP2A4QPH2 592 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CASTP20810 708 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 USP37Q86T82 979 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 PI4KAP1Q8N8J0 262 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 DIP2BQ9P265 1576 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 MAP3K5Q99683 1374 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 BACH1O14867 736 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 PHKG2P15735 406 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 UBE2Q2Q8WVN8 375 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ERO1AQ96HE7 468 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 MAST1Q9Y2H9 1570 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 KIDINS220Q9ULH0 1771 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 MAP4K4O95819 1239 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 KIAA0753Q2KHM9 967 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CHADLQ6NUI6 762 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 RNF169Q8NCN4 708 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 PPP1R14CQ8TAE6 165 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 KIAA1524Q8TCG1 905 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ARHGEF1Q92888 912 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ZHX1Q9UKY1 873 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CTAGE15A4D2H0 777 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 A6NNZ2 444 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ALDH1A1P00352 501 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CTAGE8P0CG41 777 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 TUBB8Q3ZCM7 444 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CTAGE6Q86UF2 777 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CTAGE4Q8IX94 777 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 SMARCC2Q8TAQ2 1214 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CTNNBL1Q8WYA6 563 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 OTUD5Q96G74 571 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 IQCGQ9H095 443 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 MCM9Q9NXL9 1143 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CEP83Q9Y592 693 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ATP2A1O14983 1001 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 BAG4O95429 457 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 MX1P20591 662 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ANKRD35Q8N283 1001 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 EFCC1Q9HA90 598 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CNOT7Q9UIV1 285 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 SSTR3P32745 418 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CYLC1P35663 651 aaPredicted RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CEP135Q66GS9 1140 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 IPO4Q8TEX9 1081 aaKnown RBP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ARFGAP3Q9NP61 516 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 BCCIPQ9P287 314 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPN3-202ENST00000374541 LIMCH1Q9UPQ0 1083 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 SSX2IPQ9Y2D8 614 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 ARHGEF5Q12774 1597 aa7.12□□□□□ -1.27
PTPN3-202ENST00000374541 CRB1P82279 1406 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 TMEM88BA6NKF7 163 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 ALDH1L2Q3SY69 923 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 PRPF40BQ6NWY9 871 aaKnown RBP7.11□□□□□ -1.27
PTPN3-202ENST00000374541 LMBR1LQ6UX01 489 aa7.11□□□□□ -1.27
PTPN3-202ENST00000374541 APBB1IPQ7Z5R6 666 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms