RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 NSUN7Q8NE18 718 aaKnown RBP14.78□□□□□ -0.04
PRPF4-201ENST00000374198 RHOXF2Q9BQY4 288 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 IRX2Q9BZI1 471 aaPredicted RBP14.78□□□□□ -0.04
PRPF4-201ENST00000374198 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 TRPM3Q9HCF6 1732 aaPredicted RBP14.78□□□□□ -0.04
PRPF4-201ENST00000374198 PRPF6O94906 941 aaKnown RBP14.78□□□□□ -0.04
PRPF4-201ENST00000374198 TUBBP07437 444 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 KRT32Q14532 448 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 FAM169AQ9Y6X4 670 aa14.78□□□□□ -0.04
PRPF4-201ENST00000374198 SYF2O95926 243 aaKnown RBP14.77□□□□□ -0.04
PRPF4-201ENST00000374198 AARSP49588 968 aaKnown RBP eCLIP14.77□□□□□ -0.04
PRPF4-201ENST00000374198 MTX1Q13505 466 aa14.77□□□□□ -0.04
PRPF4-201ENST00000374198 PDILTQ8N807 584 aa14.77□□□□□ -0.04
PRPF4-201ENST00000374198 NEK1Q96PY6 1258 aa14.77□□□□□ -0.04
PRPF4-201ENST00000374198 TACO1Q9BSH4 297 aaKnown RBP14.77□□□□□ -0.04
PRPF4-201ENST00000374198 DESI2Q9BSY9 194 aa14.77□□□□□ -0.04
PRPF4-201ENST00000374198 ZNF202O95125 648 aa14.77□□□□□ -0.05
PRPF4-201ENST00000374198 NBPF7P0C2Y1 421 aaPredicted RBP14.77□□□□□ -0.05
PRPF4-201ENST00000374198 TUBB2AQ13885 445 aa14.77□□□□□ -0.05
PRPF4-201ENST00000374198 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
PRPF4-201ENST00000374198 TUBB2BQ9BVA1 445 aa14.77□□□□□ -0.05
PRPF4-201ENST00000374198 VIPAS39Q9H9C1 493 aa14.77□□□□□ -0.05
PRPF4-201ENST00000374198 MRPL44Q9H9J2 332 aaKnown RBP14.77□□□□□ -0.05
PRPF4-201ENST00000374198 A1CFQ9NQ94 594 aaKnown RBP14.77□□□□□ -0.05
PRPF4-201ENST00000374198 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.05
PRPF4-201ENST00000374198 PFKFB2O60825 505 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
PRPF4-201ENST00000374198 INTS13Q9NVM9 706 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 PTPDC1A2A3K4 754 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 EBAG9O00559 213 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 MYO1BO43795 1136 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 SHOX2O60902 331 aaPredicted RBP14.76□□□□□ -0.05
PRPF4-201ENST00000374198 CTDNEP1O95476 244 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 CCT5P48643 541 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 SF3A1Q15459 793 aaKnown RBP14.76□□□□□ -0.05
PRPF4-201ENST00000374198 LINC00301Q8NCQ3 95 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 USP21Q9UK80 565 aa14.76□□□□□ -0.05
PRPF4-201ENST00000374198 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
PRPF4-201ENST00000374198 STAG1Q8WVM7 1258 aa14.75□□□□□ -0.05
PRPF4-201ENST00000374198 FAM208AQ9UK61 1670 aaKnown RBP14.75□□□□□ -0.05
PRPF4-201ENST00000374198 C21orf2O43822 256 aa14.75□□□□□ -0.05
PRPF4-201ENST00000374198 CCDC175P0C221 793 aa14.75□□□□□ -0.05
PRPF4-201ENST00000374198 ADKP55263 362 aaKnown RBP14.75□□□□□ -0.05
PRPF4-201ENST00000374198 SETQ01105 290 aaPredicted RBP14.75□□□□□ -0.05
PRPF4-201ENST00000374198 GBP6Q6ZN66 633 aa14.75□□□□□ -0.05
PRPF4-201ENST00000374198 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 ALDH1L1O75891 902 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 GUCY1B3Q02153 619 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 STK38Q15208 465 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 USPL1Q5W0Q7 1092 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 ZNF589Q86UQ0 364 aaPredicted RBP14.74□□□□□ -0.05
PRPF4-201ENST00000374198 EGFL6Q8IUX8 553 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 KCNG4Q8TDN1 519 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 FANCLQ9NW38 375 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 KIF5CO60282 957 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 INPP5BP32019 993 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 PRPF38AQ8NAV1 312 aaKnown RBP14.74□□□□□ -0.05
PRPF4-201ENST00000374198 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
PRPF4-201ENST00000374198 JPH2Q9BR39 696 aaPredicted RBP14.74□□□□□ -0.05
PRPF4-201ENST00000374198 LZTFL1Q9NQ48 299 aa14.74□□□□□ -0.05
PRPF4-201ENST00000374198 GNL3LQ9NVN8 582 aaKnown RBP14.74□□□□□ -0.05
PRPF4-201ENST00000374198 TAF5LO75529 589 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 MTHFSDQ2M296 383 aaKnown RBP14.73□□□□□ -0.05
PRPF4-201ENST00000374198 WDR93Q6P2C0 686 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 FSD1Q9BTV5 496 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 QTRT2Q9H974 415 aaKnown RBP14.73□□□□□ -0.05
PRPF4-201ENST00000374198 TUBE1Q9UJT0 475 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 USP6P35125 1406 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 CTAGE15A4D2H0 777 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 CTAGE8P0CG41 777 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 KIF4BQ2VIQ3 1234 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 CTAGE6Q86UF2 777 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 AACSQ86V21 672 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 CTAGE4Q8IX94 777 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 GIMAP7Q8NHV1 300 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 CLIC4Q9Y696 253 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 RXRBP28702 533 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 DDR1Q08345 913 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 MTF1Q14872 753 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 SPECC1LQ69YQ0 1117 aa14.73□□□□□ -0.05
PRPF4-201ENST00000374198 SEC62Q99442 399 aaKnown RBP14.73□□□□□ -0.05
PRPF4-201ENST00000374198 PPP1R12AO14974 1030 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-201ENST00000374198 SPTLC2O15270 562 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 SCP2P22307 547 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 GPTP24298 496 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 LRCH2Q5VUJ6 765 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 FNBP4Q8N3X1 1017 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-201ENST00000374198 CABS1Q96KC9 395 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 LRRC2Q9BYS8 371 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 PHAXQ9H814 394 aaKnown RBP14.72□□□□□ -0.05
PRPF4-201ENST00000374198 CTAGE9A4FU28 777 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 YEATS4O95619 227 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 PFKFB1P16118 471 aa14.72□□□□□ -0.05
PRPF4-201ENST00000374198 IRAK1P51617 712 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms