RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 HDAC9Q9UKV0 1011 aa17.54■□□□□ 0.4
SMPDL3B-201ENST00000373888 USP17L8P0C7I0 530 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 HSPD1P10809 573 aaKnown RBP17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 GNAT2P19087 354 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 BTDP43251 543 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 DYNLL1P63167 89 aaKnown RBP17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 PTH1RQ03431 593 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 OGFOD1Q8N543 542 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 NOL10Q9BSC4 688 aaKnown RBP17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 DSCC1Q9BVC3 393 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
SMPDL3B-201ENST00000373888 ADAMTSL1Q8N6G6 1762 aa17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 FOXP2O15409 715 aa17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 PLCG2P16885 1265 aa17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 VPS53Q5VIR6 699 aa17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 MAP4K1Q92918 833 aa17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 RPAP1Q9BWH6 1393 aaPredicted RBP17.52■□□□□ 0.4
SMPDL3B-201ENST00000373888 ZNF280AP59817 542 aaPredicted RBP17.52■□□□□ 0.39
SMPDL3B-201ENST00000373888 APOBEC3HQ6NTF7 200 aaKnown RBP17.52■□□□□ 0.39
SMPDL3B-201ENST00000373888 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 RHBDL3P58872 404 aa17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 CFAP100Q494V2 611 aa17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 SLC4A4Q9Y6R1 1079 aa17.51■□□□□ 0.39
SMPDL3B-201ENST00000373888 GSG1L2A8MUP6 293 aa17.5■□□□□ 0.39
SMPDL3B-201ENST00000373888 RBM5P52756 815 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMPDL3B-201ENST00000373888 SH3RF3Q8TEJ3 882 aaPredicted RBP17.5■□□□□ 0.39
SMPDL3B-201ENST00000373888 ZMYM6O95789 1325 aa17.5■□□□□ 0.39
SMPDL3B-201ENST00000373888 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 PRKAB2O43741 272 aa17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 ALX1Q15699 326 aa17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 ZBED3Q96IU2 234 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 PCDHAC2Q9Y5I4 1007 aa17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
SMPDL3B-201ENST00000373888 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 DLGAP5Q15398 846 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 DPY19L2Q6NUT2 758 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 GIMAP6Q6P9H5 292 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 MICALL2Q8IY33 904 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 SDR42E1Q8WUS8 393 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 TBC1D32Q96NH3 1257 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 EPB41L4AQ9HCS5 686 aaPredicted RBP17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 MYOZ2Q9NPC6 264 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 ATP8A2Q9NTI2 1148 aa17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 CNOT7Q9UIV1 285 aaKnown RBP17.48■□□□□ 0.39
SMPDL3B-201ENST00000373888 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 DDNO94850 711 aaPredicted RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 FGAP02671 866 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 APPP05067 770 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 HSPA4P34932 840 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 TEX11Q8IYF3 940 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 IFNL3Q8IZI9 196 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 PRMT6Q96LA8 375 aaPredicted RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 NACAP1Q9BZK3 213 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 USP40Q9NVE5 1235 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 GPRC5DQ9NZD1 345 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 MCCP23508 829 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 L3MBTL3Q96JM7 780 aaPredicted RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 MKRN1Q9UHC7 482 aaKnown RBP17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 CTNNA3Q9UI47 895 aa17.47■□□□□ 0.39
SMPDL3B-201ENST00000373888 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
SMPDL3B-201ENST00000373888 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
SMPDL3B-201ENST00000373888 WDHD1O75717 1129 aaPredicted RBP17.46■□□□□ 0.39
SMPDL3B-201ENST00000373888 KCNB2Q92953 911 aa17.46■□□□□ 0.39
SMPDL3B-201ENST00000373888 NAPBQ9H115 298 aa17.46■□□□□ 0.39
SMPDL3B-201ENST00000373888 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 ECM29Q5VYK3 1845 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 FLT1P17948 1338 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 H7C1D1 291 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 WNT10BO00744 389 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 USP5P45974 858 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 TGFBRAP1Q8WUH2 860 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 IDI2Q9BXS1 227 aa17.45■□□□□ 0.38
SMPDL3B-201ENST00000373888 SLC27A2O14975 620 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 TDO2P48775 406 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 SPDYE2Q495Y8 402 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 CREB3L3Q68CJ9 461 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 IL17RAQ96F46 866 aa17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 TDRD3Q9H7E2 651 aaKnown RBP17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 DDX60LQ5H9U9 1706 aaKnown RBP17.44■□□□□ 0.38
SMPDL3B-201ENST00000373888 EGFRP00533 1210 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 CYP21A2P08686 494 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 LMOD1P29536 600 aaPredicted RBP17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 ANAPC15P60006 121 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 KIF4BQ2VIQ3 1234 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 PALD1Q9ULE6 856 aa17.43■□□□□ 0.38
SMPDL3B-201ENST00000373888 NAV1Q8NEY1 1877 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms