RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 SRLQ86TD4 932 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 TRIM66O15016 1216 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 PRC1O43663 620 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 BMP6P22004 513 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 CASP7P55210 303 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 EFCC1Q9HA90 598 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 GPR108Q9NPR9 543 aa27.38■■□□□ 1.97
CCND3-202ENST00000372988 CDC27P30260 824 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 SPECC1LQ69YQ0 1117 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 MSL3Q8N5Y2 521 aaKnown RBP27.37■■□□□ 1.97
CCND3-202ENST00000372988 JMYQ8N9B5 988 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 C4AP0C0L4 1744 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 C4BP0C0L5 1744 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 FOXP2O15409 715 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 ZNF790Q6PG37 636 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 ATG9AQ7Z3C6 839 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 PDILTQ8N807 584 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 NEUROD6Q96NK8 337 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 RSPH14Q9UHP6 348 aa27.37■■□□□ 1.97
CCND3-202ENST00000372988 CPLX1O14810 134 aa27.36■■□□□ 1.97
CCND3-202ENST00000372988 ZNF18P17022 549 aa27.36■■□□□ 1.97
CCND3-202ENST00000372988 ADKP55263 362 aaKnown RBP27.36■■□□□ 1.97
CCND3-202ENST00000372988 ANTXR2P58335 489 aa27.36■■□□□ 1.97
CCND3-202ENST00000372988 MAP3K14Q99558 947 aa27.36■■□□□ 1.97
CCND3-202ENST00000372988 PCDHA5Q9Y5H7 936 aa27.36■■□□□ 1.97
CCND3-202ENST00000372988 AFDNP55196 1824 aaKnown RBP27.36■■□□□ 1.97
CCND3-202ENST00000372988 USP5P45974 858 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 LONRF3Q496Y0 759 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 BEND6Q5SZJ8 279 aaPredicted RBP27.35■■□□□ 1.97
CCND3-202ENST00000372988 SRGAP1Q7Z6B7 1085 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 C10orf67Q8IYJ2 551 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 OSBP2Q969R2 916 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 ANKZF1Q9H8Y5 726 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 PHF8Q9UPP1 1060 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 CUTAO60888 179 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 PLCD3Q8N3E9 789 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 CCDC12Q8WUD4 166 aaPredicted RBP27.35■■□□□ 1.97
CCND3-202ENST00000372988 MRPL44Q9H9J2 332 aaKnown RBP27.35■■□□□ 1.97
CCND3-202ENST00000372988 RAB21Q9UL25 225 aa27.35■■□□□ 1.97
CCND3-202ENST00000372988 SLIT3O75094 1523 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 SPEF2Q9C093 1822 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 CHMP4BP1P59074 171 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 SLC39A6Q13433 755 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 RAB11FIP4Q86YS3 637 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 ELOA2Q8IYF1 753 aaPredicted RBP27.34■■□□□ 1.97
CCND3-202ENST00000372988 RRP15Q9Y3B9 282 aaKnown RBP27.34■■□□□ 1.97
CCND3-202ENST00000372988 TIMM10P62072 90 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 MDM2Q00987 491 aaPredicted RBP27.34■■□□□ 1.97
CCND3-202ENST00000372988 KARSQ15046 597 aaKnown RBP27.34■■□□□ 1.97
CCND3-202ENST00000372988 CCDC102BQ68D86 513 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 DESI2Q9BSY9 194 aa27.34■■□□□ 1.97
CCND3-202ENST00000372988 TMEM94Q12767 1356 aa27.33■■□□□ 1.97
CCND3-202ENST00000372988 A0A087WZG4 1122 aa27.33■■□□□ 1.97
CCND3-202ENST00000372988 LMBR1LQ6UX01 489 aa27.33■■□□□ 1.97
CCND3-202ENST00000372988 VPS37DQ86XT2 251 aa27.33■■□□□ 1.97
CCND3-202ENST00000372988 CLIC6Q96NY7 704 aa27.33■■□□□ 1.97
CCND3-202ENST00000372988 HAND2P61296 217 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 IMMTQ16891 758 aaKnown RBP27.32■■□□□ 1.96
CCND3-202ENST00000372988 MSANTD4Q8NCY6 345 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 PDE11AQ9HCR9 933 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.32■■□□□ 1.96
CCND3-202ENST00000372988 CAMTA1Q9Y6Y1 1673 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 RPS6KA5O75582 802 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 IFIT1P09914 478 aaKnown RBP27.32■■□□□ 1.96
CCND3-202ENST00000372988 NOP2P46087 812 aaKnown RBP27.32■■□□□ 1.96
CCND3-202ENST00000372988 HDXQ7Z353 690 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 CNNM3Q8NE01 707 aa27.32■■□□□ 1.96
CCND3-202ENST00000372988 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 POTEB2H3BUK9 544 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 AIFM3Q96NN9 605 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 KCNH3Q9ULD8 1083 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 CPDO75976 1380 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 KCNA6P17658 529 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 FOXO4P98177 505 aa27.31■■□□□ 1.96
CCND3-202ENST00000372988 FMR1Q06787 632 aaKnown RBP eCLIP27.31■■□□□ 1.961e-6■■■■□ 20.4
CCND3-202ENST00000372988 IRX2Q9BZI1 471 aaPredicted RBP27.31■■□□□ 1.96
CCND3-202ENST00000372988 PLEKHG2Q9H7P9 1386 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 IVLP07476 585 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 TNNT3P45378 269 aaPredicted RBP27.3■■□□□ 1.96
CCND3-202ENST00000372988 MTF1Q14872 753 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 HSP90AA4PQ58FG1 418 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 CEP112Q8N8E3 955 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 ENOX1Q8TC92 643 aaKnown RBP27.3■■□□□ 1.96
CCND3-202ENST00000372988 ALG1Q9BT22 464 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 VPS18Q9P253 973 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 MAN1B1Q9UKM7 699 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 NFE2L3Q9Y4A8 694 aa27.3■■□□□ 1.96
CCND3-202ENST00000372988 FGAP02671 866 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 CCDC175P0C221 793 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 KRT40Q6A162 431 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 NCOA7Q8NI08 942 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.29■■□□□ 1.96
CCND3-202ENST00000372988 RAI14Q9P0K7 980 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 CDC23Q9UJX2 597 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 ATP5J2-PTCD1G3V325 749 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 FOXN1O15353 648 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 PTCD1O75127 700 aaKnown RBP27.29■■□□□ 1.96
CCND3-202ENST00000372988 LEKR1Q6ZMV7 388 aa27.29■■□□□ 1.96
CCND3-202ENST00000372988 PANX2Q96RD6 677 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms