RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 IGKV5-2P06315 115 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 TATP17735 454 aaPredicted RBP20.96■□□□□ 0.95
MMP9-201ENST00000372330 MNAT1P51948 309 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 CASP8Q14790 479 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 CCDC102AQ96A19 550 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 FMNL2Q96PY5 1086 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 BAG1Q99933 345 aaPredicted RBP20.96■□□□□ 0.95
MMP9-201ENST00000372330 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.96■□□□□ 0.95
MMP9-201ENST00000372330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.96■□□□□ 0.95
MMP9-201ENST00000372330 SLC3A2P08195 630 aaKnown RBP20.96■□□□□ 0.95
MMP9-201ENST00000372330 AACSQ86V21 672 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 STRCQ7RTU9 1775 aa20.96■□□□□ 0.95
MMP9-201ENST00000372330 C5P01031 1676 aa20.95■□□□□ 0.95
MMP9-201ENST00000372330 SASH1O94885 1247 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 SERPINC1P01008 464 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 LMOD1P29536 600 aaPredicted RBP20.95■□□□□ 0.94
MMP9-201ENST00000372330 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 FAM204AQ9H8W3 233 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 VIPAS39Q9H9C1 493 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 ABCB6Q9NP58 842 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 TDO2P48775 406 aa20.95■□□□□ 0.94
MMP9-201ENST00000372330 G3BP1Q13283 466 aaKnown RBP eCLIP20.95■□□□□ 0.94
MMP9-201ENST00000372330 CTCFLQ8NI51 663 aaPredicted RBP20.95■□□□□ 0.94
MMP9-201ENST00000372330 CCDC12Q8WUD4 166 aaPredicted RBP20.95■□□□□ 0.94
MMP9-201ENST00000372330 A1CFQ9NQ94 594 aaKnown RBP20.95■□□□□ 0.94
MMP9-201ENST00000372330 SCN11AQ9UI33 1791 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 MEGF6O75095 1541 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 NEXNQ0ZGT2 675 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 CFAP100Q494V2 611 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 CDC23Q9UJX2 597 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 MYL6BP14649 208 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 PCDHA7Q9UN72 937 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
MMP9-201ENST00000372330 WDHD1O75717 1129 aaPredicted RBP20.93■□□□□ 0.94
MMP9-201ENST00000372330 HNRNPH1P31943 449 aaKnown RBP20.93■□□□□ 0.94
MMP9-201ENST00000372330 SETQ01105 290 aaPredicted RBP20.93■□□□□ 0.94
MMP9-201ENST00000372330 IFNL2Q8IZJ0 200 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 AFAP1L1Q8TED9 768 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 STAG1Q8WVM7 1258 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 EAF2Q96CJ1 260 aaPredicted RBP20.93■□□□□ 0.94
MMP9-201ENST00000372330 NEURL1BA8MQ27 555 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 ANKRD65E5RJM6 399 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 RTEL1Q9NZ71 1219 aa20.93■□□□□ 0.94
MMP9-201ENST00000372330 AARSP49588 968 aaKnown RBP eCLIP20.92■□□□□ 0.94
MMP9-201ENST00000372330 NMIQ13287 307 aaPredicted RBP20.92■□□□□ 0.94
MMP9-201ENST00000372330 CHRNA2Q15822 529 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 POTEDQ86YR6 584 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 XAGE3Q8WTP9 111 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 ZNF496Q96IT1 587 aaPredicted RBP20.92■□□□□ 0.94
MMP9-201ENST00000372330 SPATA31A3Q5VYP0 1347 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 COL18A1P39060 1754 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 NDUFA8P51970 172 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 MYL5Q02045 173 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 COPS6Q7L5N1 327 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 FTOQ9C0B1 505 aaKnown RBP eCLIP20.92■□□□□ 0.94
MMP9-201ENST00000372330 HSD3B7Q9H2F3 369 aa20.92■□□□□ 0.94
MMP9-201ENST00000372330 ATP1A3P13637 1013 aa20.91■□□□□ 0.94
MMP9-201ENST00000372330 COL9A3Q14050 684 aaPredicted RBP20.91■□□□□ 0.94
MMP9-201ENST00000372330 GCKRQ14397 625 aa20.91■□□□□ 0.94
MMP9-201ENST00000372330 PNKPQ96T60 521 aa20.91■□□□□ 0.94
MMP9-201ENST00000372330 METTL22Q9BUU2 404 aaPredicted RBP20.91■□□□□ 0.94
MMP9-201ENST00000372330 ABCC6O95255 1503 aa20.91■□□□□ 0.94
MMP9-201ENST00000372330 MYH15Q9Y2K3 1946 aa20.91■□□□□ 0.94
MMP9-201ENST00000372330 A0A1B0GVL5 298 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 PIP4K2AP48426 406 aaPredicted RBP20.9■□□□□ 0.94
MMP9-201ENST00000372330 TBX2Q13207 712 aaPredicted RBP20.9■□□□□ 0.94
MMP9-201ENST00000372330 BRINP3Q76B58 766 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 KCNG4Q8TDN1 519 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 FAM227BQ96M60 508 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 NEK1Q96PY6 1258 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 JCADQ9P266 1359 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 EXOC5O00471 708 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 EBAG9O00559 213 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 CSB-PGBD3P0DP91 1061 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 EP400NLQ6ZTU2 488 aa20.9■□□□□ 0.94
MMP9-201ENST00000372330 CCDC8Q9H0W5 538 aaPredicted RBP20.9■□□□□ 0.94
MMP9-201ENST00000372330 ZNF335Q9H4Z2 1342 aaPredicted RBP20.9■□□□□ 0.94
MMP9-201ENST00000372330 PFKFB2O60825 505 aa20.89■□□□□ 0.94
MMP9-201ENST00000372330 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.94
MMP9-201ENST00000372330 TTLL5Q6EMB2 1281 aa20.89■□□□□ 0.94
MMP9-201ENST00000372330 DCAF5Q96JK2 942 aa20.89■□□□□ 0.94
MMP9-201ENST00000372330 MYD88Q99836 296 aa20.89■□□□□ 0.94
MMP9-201ENST00000372330 SNRPA1P09661 255 aaKnown RBP20.89■□□□□ 0.93
MMP9-201ENST00000372330 USPL1Q5W0Q7 1092 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 LRP10Q7Z4F1 713 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 TTC5Q8N0Z6 440 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 KAT2BQ92831 832 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 SIL1Q9H173 461 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 NEDD4P46934 1319 aa20.89■□□□□ 0.93
MMP9-201ENST00000372330 C21orf2O43822 256 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 SHOX2O60902 331 aaPredicted RBP20.88■□□□□ 0.93
MMP9-201ENST00000372330 RNF40O75150 1001 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 PHACTR2O75167 634 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 CCDC175P0C221 793 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 SF3A1Q15459 793 aaKnown RBP20.88■□□□□ 0.93
MMP9-201ENST00000372330 ANKRD13DQ6ZTN6 518 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 DPF2Q92785 391 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 CYP27B1O15528 508 aa20.88■□□□□ 0.93
MMP9-201ENST00000372330 PIP4K2BP78356 416 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms