RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 FILIP1Q7Z7B0 1213 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 MIEF2Q96C03 454 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 N4BP2Q86UW6 1770 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 XIRP1Q702N8 1843 aaKnown RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L21D6R901 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ST18O60284 1047 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ANXA1P04083 346 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 NBPF7P0C2Y1 421 aaPredicted RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ERCC6LQ2NKX8 1250 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 TSHZ3Q63HK5 1081 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 PPP1R42Q7Z4L9 355 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 UBXN4Q92575 508 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 A1CFQ9NQ94 594 aaKnown RBP10.23□□□□□ -0.77
ATG4A-203ENST00000372232 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ADAM21Q9UKJ8 722 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
ATG4A-203ENST00000372232 ERC2O15083 957 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 LMAN1P49257 510 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 TADA2BQ86TJ2 420 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 DDX17Q92841 729 aaKnown RBP10.22□□□□□ -0.77
ATG4A-203ENST00000372232 MKRN1Q9UHC7 482 aaKnown RBP10.22□□□□□ -0.77
ATG4A-203ENST00000372232 ADCY9O60503 1353 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 A0A087WUV0 522 aaPredicted RBP10.22□□□□□ -0.77
ATG4A-203ENST00000372232 USP8P40818 1118 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
ATG4A-203ENST00000372232 C9orf131Q5VYM1 1079 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 ZCCHC17Q9NP64 241 aaKnown RBP10.22□□□□□ -0.77
ATG4A-203ENST00000372232 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 DCCP43146 1447 aa10.22□□□□□ -0.77
ATG4A-203ENST00000372232 RAB11FIP3O75154 756 aa10.21□□□□□ -0.77
ATG4A-203ENST00000372232 ANAPC15P60006 121 aa10.21□□□□□ -0.77
ATG4A-203ENST00000372232 USP48Q86UV5 1035 aa10.21□□□□□ -0.77
ATG4A-203ENST00000372232 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.77
ATG4A-203ENST00000372232 ALS2Q96Q42 1657 aa10.21□□□□□ -0.77
ATG4A-203ENST00000372232 PRAMEF22A3QJZ6 481 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 SRGAP3O43295 1099 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 SURF6O75683 361 aaKnown RBP10.21□□□□□ -0.78
ATG4A-203ENST00000372232 FOSBP53539 338 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 MTMR2Q13614 643 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 PROSER3Q2NL68 480 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 CCDC93Q567U6 631 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 FBXO33Q7Z6M2 555 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 POTEDQ86YR6 584 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF513Q8N8E2 541 aaPredicted RBP10.21□□□□□ -0.78
ATG4A-203ENST00000372232 RAPGEF4Q8WZA2 1011 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 TATDN2Q93075 761 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 NLRP2Q9NX02 1062 aa10.21□□□□□ -0.78
ATG4A-203ENST00000372232 AOX1Q06278 1338 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 IPO7O95373 1038 aaKnown RBP10.2□□□□□ -0.78
ATG4A-203ENST00000372232 TBC1D8O95759 1140 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 ARHGAP29Q52LW3 1261 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 KSR2Q6VAB6 950 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 NUDT18Q6ZVK8 323 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 FAM174AQ8TBP5 190 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 IL1RAPL2Q9NP60 686 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 PDRG1Q9NUG6 133 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 GNL3LQ9NVN8 582 aaKnown RBP10.2□□□□□ -0.78
ATG4A-203ENST00000372232 MAP3K2Q9Y2U5 619 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 NPHP3Q7Z494 1330 aa10.2□□□□□ -0.78
ATG4A-203ENST00000372232 SLC34A2O95436 690 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 SKIP12755 728 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 MNAT1P51948 309 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF211Q13398 564 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 NAIF1Q69YI7 327 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ZNF662Q6ZS27 426 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 RHPN1Q8TCX5 695 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 CACTINQ8WUQ7 758 aaKnown RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 HYPKQ9NX55 129 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ORC3Q9UBD5 711 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 RPS6KL1Q9Y6S9 549 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 NEMFO60524 1076 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ALDH1L1O75891 902 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 SASH3O75995 380 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ADCY2Q08462 1091 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 MTA1Q13330 715 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 TTC19Q6DKK2 380 aaPredicted RBP10.19□□□□□ -0.78
ATG4A-203ENST00000372232 PLA2G4DQ86XP0 818 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 FMNL3Q8IVF7 1028 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ESYT1Q9BSJ8 1104 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 PRDM16Q9HAZ2 1276 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 ETAA1Q9NY74 926 aa10.19□□□□□ -0.78
ATG4A-203ENST00000372232 USP27XA6NNY8 438 aa10.18□□□□□ -0.78
ATG4A-203ENST00000372232 MAFGO15525 162 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms