RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 SDR42E1Q8WUS8 393 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 FBXW7Q969H0 707 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 AIDAQ96BJ3 306 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 TTC14Q96N46 770 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
LCN1-202ENST00000371781 TAOK3Q9H2K8 898 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 AATFQ9NY61 560 aaKnown RBP eCLIP13.01□□□□□ -0.33
LCN1-202ENST00000371781 DAGLAQ9Y4D2 1042 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
LCN1-202ENST00000371781 SIPA1L1O43166 1804 aa13□□□□□ -0.33
LCN1-202ENST00000371781 F8W031 263 aaPredicted RBP13□□□□□ -0.33
LCN1-202ENST00000371781 SLC4A3P48751 1232 aa13□□□□□ -0.33
LCN1-202ENST00000371781 RHBDL3P58872 404 aa13□□□□□ -0.33
LCN1-202ENST00000371781 FKBP1AP62942 108 aaKnown RBP13□□□□□ -0.33
LCN1-202ENST00000371781 ALX1Q15699 326 aa13□□□□□ -0.33
LCN1-202ENST00000371781 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
LCN1-202ENST00000371781 STRIP1Q5VSL9 837 aa13□□□□□ -0.33
LCN1-202ENST00000371781 SPTY2D1Q68D10 685 aaPredicted RBP13□□□□□ -0.33
LCN1-202ENST00000371781 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
LCN1-202ENST00000371781 SH3RF3Q8TEJ3 882 aaPredicted RBP13□□□□□ -0.33
LCN1-202ENST00000371781 GMLQ99445 158 aa13□□□□□ -0.33
LCN1-202ENST00000371781 GPR75-ASB3A0A0A6YYF3 556 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 IGSF3O75054 1194 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 MCCP23508 829 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 PPP4CP60510 307 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 HAND2P61296 217 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 IFNL3Q8IZI9 196 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 SNX21Q969T3 373 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
LCN1-202ENST00000371781 JAKMIP1Q96N16 626 aaKnown RBP12.99□□□□□ -0.33
LCN1-202ENST00000371781 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
LCN1-202ENST00000371781 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
LCN1-202ENST00000371781 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
LCN1-202ENST00000371781 CYP2D7A0A087X1C5 515 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
LCN1-202ENST00000371781 PSMD14O00487 310 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 RAD17O75943 681 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 BTDP43251 543 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 SCNN1DP51172 638 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 HTRA3P83110 453 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 C9orf131Q5VYM1 1079 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 TTF2Q9UNY4 1162 aaKnown RBP12.98□□□□□ -0.33
LCN1-202ENST00000371781 SUGT1Q9Y2Z0 365 aa12.98□□□□□ -0.33
LCN1-202ENST00000371781 NEDD4P46934 1319 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 E7EWF7 191 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 CYP2D6P10635 497 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 RSBN1LQ6PCB5 846 aaPredicted RBP12.97□□□□□ -0.33
LCN1-202ENST00000371781 TMED8Q6PL24 325 aaPredicted RBP12.97□□□□□ -0.33
LCN1-202ENST00000371781 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 TCEANC2Q96MN5 208 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 VPS33BQ9H267 617 aa12.97□□□□□ -0.33
LCN1-202ENST00000371781 MYH1P12882 1939 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 SHTN1A0MZ66 631 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 VIL1P09327 827 aaKnown RBP12.96□□□□□ -0.33
LCN1-202ENST00000371781 CRKP46108 304 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 CXCL9Q07325 125 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.33
LCN1-202ENST00000371781 NIM1KQ8IY84 436 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.33
LCN1-202ENST00000371781 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 ZNRF3Q9ULT6 936 aa12.96□□□□□ -0.33
LCN1-202ENST00000371781 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
LCN1-202ENST00000371781 G3V3G9 751 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 WDHD1O75717 1129 aaPredicted RBP12.95□□□□□ -0.34
LCN1-202ENST00000371781 LARGE1O95461 756 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 GNAT2P19087 354 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 CASTP20810 708 aaKnown RBP12.95□□□□□ -0.34
LCN1-202ENST00000371781 RPS6KB1P23443 525 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 NEK4P51957 841 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 ANTXR2P58335 489 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 GSTO1P78417 241 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 CTDSPL2Q05D32 466 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 ST3GAL1Q11201 340 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
LCN1-202ENST00000371781 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
LCN1-202ENST00000371781 DDRGK1Q96HY6 314 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
LCN1-202ENST00000371781 RNF181Q9P0P0 153 aa12.95□□□□□ -0.34
LCN1-202ENST00000371781 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 FLT1P17948 1338 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 FZD9O00144 591 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 USP17L8P0C7I0 530 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 TDO2P48775 406 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 AK2P54819 239 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
LCN1-202ENST00000371781 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 HHIPL2Q6UWX4 724 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 RUFY3Q7L099 469 aa12.94□□□□□ -0.34
LCN1-202ENST00000371781 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
LCN1-202ENST00000371781 NAPBQ9H115 298 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms