RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ADCY5O95622 1261 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 PLIN2Q99541 437 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 RTL1A6NKG5 1358 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 ZBED4O75132 1171 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 USP44Q9H0E7 712 aa16.7■□□□□ 0.26
NDC1-201ENST00000371429 GYG1P46976 350 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 ZNF174Q15697 407 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 GPHNQ9NQX3 736 aaPredicted RBP16.69■□□□□ 0.26
NDC1-201ENST00000371429 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
NDC1-201ENST00000371429 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 NSMFQ6X4W1 530 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 FERMT1Q9BQL6 677 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.69■□□□□ 0.266e-6■□□□□ 9.1
NDC1-201ENST00000371429 INTS4Q96HW7 963 aaKnown RBP16.69■□□□□ 0.26
NDC1-201ENST00000371429 SGSM2O43147 1006 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
NDC1-201ENST00000371429 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
NDC1-201ENST00000371429 KDRP35968 1356 aa16.69■□□□□ 0.26
NDC1-201ENST00000371429 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 ATP5JP18859 108 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 KIAA0825Q8IV33 1275 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 CSADQ9Y600 493 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 MRVI1Q9Y6F6 885 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 ACTN2P35609 894 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 TFAP4Q01664 338 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 DOK7Q18PE1 504 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 RILPL1Q5EBL4 403 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 ANO6Q4KMQ2 910 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 UNC5CLQ8IV45 518 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 AATKQ6ZMQ8 1374 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 ERBB3P21860 1342 aa16.68■□□□□ 0.26
NDC1-201ENST00000371429 RBM10P98175 930 aaKnown RBP16.68■□□□□ 0.26
NDC1-201ENST00000371429 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
NDC1-201ENST00000371429 MYCLP12524 364 aaPredicted RBP16.67■□□□□ 0.26
NDC1-201ENST00000371429 CHMP2AO43633 222 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
NDC1-201ENST00000371429 CCDC113Q9H0I3 377 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 UVSSAQ2YD98 709 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 AKNAD1Q5T1N1 836 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 TTC16Q8NEE8 873 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 GOPCQ9HD26 462 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
NDC1-201ENST00000371429 GIGYF2Q6Y7W6 1299 aaKnown RBP16.67■□□□□ 0.26
NDC1-201ENST00000371429 NAA15Q9BXJ9 866 aaKnown RBP16.67■□□□□ 0.26
NDC1-201ENST00000371429 BICDL2A1A5D9 508 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
NDC1-201ENST00000371429 USP6P35125 1406 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 IGSF1Q8N6C5 1336 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 UQCRHP07919 91 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 MAP9Q49MG5 647 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 CYLC1P35663 651 aaPredicted RBP16.66■□□□□ 0.26
NDC1-201ENST00000371429 CCT6AP40227 531 aaKnown RBP16.66■□□□□ 0.26
NDC1-201ENST00000371429 BCAMP50895 628 aa16.66■□□□□ 0.26
NDC1-201ENST00000371429 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
NDC1-201ENST00000371429 USP17L12C9JPN9 530 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 USP17L21D6R901 530 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 CHRNDQ07001 517 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 BEND3Q5T5X7 828 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 BRINP3Q76B58 766 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 SV2BQ7L1I2 683 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 PLVAPQ9BX97 442 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.65■□□□□ 0.26
NDC1-201ENST00000371429 HOMER2Q9NSB8 354 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 ARPP21Q9UBL0 812 aaPredicted RBP16.65■□□□□ 0.26
NDC1-201ENST00000371429 SYT1P21579 422 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 IFFO1Q0D2I5 559 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 DPH6Q7L8W6 267 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 AOPEPQ8N6M6 819 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 SCNN1DP51172 638 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 KCNQ4P56696 695 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
NDC1-201ENST00000371429 PPP2R5BQ15173 497 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 TMCO3Q6UWJ1 677 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 SSH3Q8TE77 659 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 C16orf45Q96MC5 204 aaPredicted RBP16.65■□□□□ 0.26
NDC1-201ENST00000371429 DNAJC25Q9H1X3 360 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 PRR36Q9H6K5 1346 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 SERPINB2P05120 415 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 PLCD1P51178 756 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 STX17P56962 302 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 MYL10Q9BUA6 226 aa16.65■□□□□ 0.26
NDC1-201ENST00000371429 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
NDC1-201ENST00000371429 USH1GQ495M9 461 aa16.64■□□□□ 0.25
NDC1-201ENST00000371429 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
NDC1-201ENST00000371429 APBB1IPQ7Z5R6 666 aaPredicted RBP16.64■□□□□ 0.25
NDC1-201ENST00000371429 SNX14Q9Y5W7 946 aa16.64■□□□□ 0.25
NDC1-201ENST00000371429 HAUS3Q68CZ6 603 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms