RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 ELF1P32519 619 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 STK11IPQ8N1F8 1099 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 GIMAP7Q8NHV1 300 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 BCCIPQ9P287 314 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 TRIM10Q9UDY6 481 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 ADGRG1Q9Y653 693 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 IKBKBO14920 756 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 STX10O60499 249 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 SRGAP2O75044 1071 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTCFLQ8NI51 663 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 MED15Q96RN5 788 aa10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 ALDH8A1Q9H2A2 487 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-204ENST00000370852 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 ENC1O14682 589 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 PFKFB2O60825 505 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 CEP112Q8N8E3 955 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 SAMSN1Q9NSI8 373 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 RTEL1Q9NZ71 1219 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 CCDC9Q9Y3X0 531 aaKnown RBP10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 MAP3K19Q56UN5 1328 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 RPGRIP1LQ68CZ1 1315 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 FRMPD1Q5SYB0 1578 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 EME2A4GXA9 379 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 SPTLC2O15270 562 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 SHOX2O60902 331 aaPredicted RBP10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 COBLO75128 1261 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 SASH1O94885 1247 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 GNGT1P63211 74 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 CENPHQ9H3R5 247 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 MED23Q9ULK4 1368 aa10.75□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTAGE15A4D2H0 777 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CBFA2T2O43439 604 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTAGE8P0CG41 777 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 PDHBP11177 359 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 RBL2Q08999 1139 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTAGE6Q86UF2 777 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTAGE4Q8IX94 777 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 PI4KAP2A4QPH2 592 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 PPP1R12AO14974 1030 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CCDC175P0C221 793 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 AARSP49588 968 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CCNHP51946 323 aaPredicted RBP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 STIM1Q13586 685 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 SPECC1LQ69YQ0 1117 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 METTL16Q86W50 562 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 MSL3Q8N5Y2 521 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 PI4KAP1Q8N8J0 262 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 XAGE2Q96GT9 111 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 CABS1Q96KC9 395 aa10.74□□□□□ -0.69
HMGCLL1-204ENST00000370852 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 A0A1W2PQ27 194 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 A0A1W2PQ64 194 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 A0A1W2PQD8 194 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 H0YHG0 523 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 C21orf2O43822 256 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 KIF5CO60282 957 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 SSBP05455 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 GRAMD1CQ8IYS0 662 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 CAPZA3Q96KX2 299 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 MMS19Q96T76 1030 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 GOLGA6L9A6NEM1 432 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 RNF225M0QZC1 329 aaPredicted RBP10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 ALDH1L1O75891 902 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 TEFQ10587 303 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 PDCLQ13371 301 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 SHC4Q6S5L8 630 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 CARMIL3Q8ND23 1372 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 FAM76AQ8TAV0 307 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 SEC31BQ9NQW1 1179 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 TUBE1Q9UJT0 475 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 PCDHA5Q9Y5H7 936 aa10.73□□□□□ -0.69
HMGCLL1-204ENST00000370852 CLTCQ00610 1675 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 FAM208AQ9UK61 1670 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 SALL1Q9NSC2 1324 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 GOLGA6CA6NDK9 693 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 GOLGA6DP0CG33 693 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 CDC25AP30304 524 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 HDGFP51858 240 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 TBC1D8BQ0IIM8 1120 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 BEND3Q5T5X7 828 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 AIFM3Q96NN9 605 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 C19orf44Q9H6X5 657 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 GOLGA6AQ9NYA3 693 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 NFE2L3Q9Y4A8 694 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 SETD1BQ9UPS6 1966 aaKnown RBP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 POTEB2H3BUK9 544 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 EIF3HO15372 352 aaKnown RBP eCLIP10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 SYKP43405 635 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 ATP1A2P50993 1020 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 HDGFL1Q5TGJ6 251 aa10.72□□□□□ -0.69
HMGCLL1-204ENST00000370852 FAM228AQ86W67 206 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms