RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
LMO4-201ENST00000370542 TEKT1Q969V4 418 aa18.36■□□□□ 0.53
LMO4-201ENST00000370542 TRIOBPQ9H2D6 2365 aa18.36■□□□□ 0.53
LMO4-201ENST00000370542 HDAC5Q9UQL6 1122 aa18.36■□□□□ 0.53
LMO4-201ENST00000370542 CHAF1AQ13111 956 aaPredicted RBP18.35■□□□□ 0.53
LMO4-201ENST00000370542 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
LMO4-201ENST00000370542 CDAN1Q8IWY9 1227 aa18.35■□□□□ 0.53
LMO4-201ENST00000370542 COPRSQ9NQ92 184 aa18.35■□□□□ 0.53
LMO4-201ENST00000370542 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
LMO4-201ENST00000370542 MAST3O60307 1309 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 OTOFQ9HC10 1997 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 IGF2BP3O00425 579 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMO4-201ENST00000370542 FRAT2O75474 233 aaPredicted RBP18.34■□□□□ 0.53
LMO4-201ENST00000370542 SLC5A1P13866 664 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 TNNI2P48788 182 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.34■□□□□ 0.53
LMO4-201ENST00000370542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.34■□□□□ 0.53
LMO4-201ENST00000370542 WDR66Q8TBY9 1149 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 TMEM39BQ9GZU3 492 aa18.34■□□□□ 0.53
LMO4-201ENST00000370542 TCP10L2B9ZVM9 353 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 H0YGN5 161 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 IL15P40933 162 aaPredicted RBP18.33■□□□□ 0.52
LMO4-201ENST00000370542 MTX1Q13505 466 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 NFKBIBQ15653 356 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 OTOP1Q7RTM1 612 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 ARMC5Q96C12 935 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 MS4A4AQ96JQ5 239 aa18.33■□□□□ 0.52
LMO4-201ENST00000370542 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.52
LMO4-201ENST00000370542 SALL1Q9NSC2 1324 aa18.32■□□□□ 0.52
LMO4-201ENST00000370542 MNX1P50219 401 aaPredicted RBP18.32■□□□□ 0.52
LMO4-201ENST00000370542 MEIS3Q99687 375 aa18.32■□□□□ 0.52
LMO4-201ENST00000370542 PTPN18Q99952 460 aa18.32■□□□□ 0.52
LMO4-201ENST00000370542 CEP126Q9P2H0 1117 aa18.32■□□□□ 0.52
LMO4-201ENST00000370542 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
LMO4-201ENST00000370542 MAP3K9P80192 1104 aa18.31■□□□□ 0.52
LMO4-201ENST00000370542 TRIM17Q9Y577 477 aa18.31■□□□□ 0.52
LMO4-201ENST00000370542 MYH13Q9UKX3 1938 aa18.3■□□□□ 0.52
LMO4-201ENST00000370542 SEMA3EO15041 775 aa18.3■□□□□ 0.52
LMO4-201ENST00000370542 ATP2B3Q16720 1220 aa18.3■□□□□ 0.52
LMO4-201ENST00000370542 OPTNQ96CV9 577 aa18.3■□□□□ 0.52
LMO4-201ENST00000370542 VGLL4Q14135 290 aa18.29■□□□□ 0.52
LMO4-201ENST00000370542 SIL1Q9H173 461 aa18.29■□□□□ 0.52
LMO4-201ENST00000370542 ELP3Q9H9T3 547 aa18.29■□□□□ 0.52
LMO4-201ENST00000370542 PA2G4Q9UQ80 394 aaKnown RBP18.29■□□□□ 0.52
LMO4-201ENST00000370542 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
LMO4-201ENST00000370542 GNAI3P08754 354 aa18.28■□□□□ 0.52
LMO4-201ENST00000370542 CACNB3P54284 484 aa18.28■□□□□ 0.52
LMO4-201ENST00000370542 OTUD7BQ6GQQ9 843 aa18.28■□□□□ 0.52
LMO4-201ENST00000370542 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
LMO4-201ENST00000370542 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
LMO4-201ENST00000370542 PDS5AQ29RF7 1337 aaKnown RBP18.27■□□□□ 0.52
LMO4-201ENST00000370542 SPDYE5A6NIY4 337 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 PRDX5P30044 214 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 PHKA1P46020 1223 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 HOOK2Q96ED9 719 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 GNL3LQ9NVN8 582 aaKnown RBP18.27■□□□□ 0.52
LMO4-201ENST00000370542 TMOD2Q9NZR1 351 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 DENND2AQ9ULE3 1009 aa18.27■□□□□ 0.52
LMO4-201ENST00000370542 KIAA0100Q14667 2235 aaKnown RBP18.27■□□□□ 0.52
LMO4-201ENST00000370542 CEP290O15078 2479 aa18.27■□□□□ 0.51
LMO4-201ENST00000370542 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
LMO4-201ENST00000370542 TRIM27P14373 513 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 CRHR2Q13324 411 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 CCDC102BQ68D86 513 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 CDC42EP5Q6NZY7 148 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 FAM151AQ8WW52 585 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 CNKSR2Q8WXI2 1034 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 BRI3BPQ8WY22 251 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 SNCAIPQ9Y6H5 919 aa18.26■□□□□ 0.51
LMO4-201ENST00000370542 GTF2A2P52657 109 aa18.25■□□□□ 0.51
LMO4-201ENST00000370542 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
LMO4-201ENST00000370542 ATF7IPQ6VMQ6 1270 aa18.25■□□□□ 0.51
LMO4-201ENST00000370542 ZNF112Q9UJU3 913 aa18.25■□□□□ 0.51
LMO4-201ENST00000370542 CSADQ9Y600 493 aa18.25■□□□□ 0.51
LMO4-201ENST00000370542 LDHBP07195 334 aaKnown RBP18.24■□□□□ 0.51
LMO4-201ENST00000370542 ADORA1P30542 326 aa18.24■□□□□ 0.51
LMO4-201ENST00000370542 DIXDC1Q155Q3 683 aa18.24■□□□□ 0.51
LMO4-201ENST00000370542 ERO1BQ86YB8 467 aa18.24■□□□□ 0.51
LMO4-201ENST00000370542 FAM163AQ96GL9 167 aaPredicted RBP18.24■□□□□ 0.51
LMO4-201ENST00000370542 PRO3102Q9H379 93 aa18.24■□□□□ 0.51
LMO4-201ENST00000370542 ZCCHC17Q9NP64 241 aaKnown RBP18.24■□□□□ 0.51
LMO4-201ENST00000370542 GAKO14976 1311 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 SRGAP3O43295 1099 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 BCAR3O75815 825 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 TIMM10P62072 90 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 DCAF15Q66K64 600 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
LMO4-201ENST00000370542 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 ZNF333Q96JL9 665 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 TMEM106CQ9BVX2 250 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 FAM198AQ9UFP1 575 aa18.23■□□□□ 0.51
LMO4-201ENST00000370542 RFX7Q2KHR2 1363 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 CCL15-CCL14A0A0B4J2E2 113 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 A0A1B0GUL7 405 aa18.22■□□□□ 0.51
LMO4-201ENST00000370542 CAP1Q01518 475 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms