RNA–Protein interactions for RNA: ENST00000370096.7

COL11A1-203, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene COL11A1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-203ENST00000370096 LCA5Q86VQ0 697 aa12.42□□□□□ -0.42
COL11A1-203ENST00000370096 MEIS3Q99687 375 aa12.42□□□□□ -0.42
COL11A1-203ENST00000370096 PPME1Q9Y570 386 aa12.42□□□□□ -0.42
COL11A1-203ENST00000370096 GOLGA6BA6NDN3 693 aa12.42□□□□□ -0.42
COL11A1-203ENST00000370096 TUBB4BP68371 445 aa12.42□□□□□ -0.42
COL11A1-203ENST00000370096 TBC1D8O95759 1140 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 TUBB4AP04350 444 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 PEX19P40855 299 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 PHLDB2Q86SQ0 1253 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 IFT20Q8IY31 132 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 NAA16Q6N069 864 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-203ENST00000370096 ZNF365Q70YC5 407 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 TMTC2Q8N394 836 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 MICAL1Q8TDZ2 1067 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 ASIC3Q9UHC3 531 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 GIPC1O14908 333 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 MAGEB6Q8N7X4 407 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL11A1-203ENST00000370096 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
COL11A1-203ENST00000370096 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-203ENST00000370096 TAOK1Q7L7X3 1001 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 I3L4J1 428 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 KIFAP3Q92845 792 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 XAB2Q9HCS7 855 aaKnown RBP12.41□□□□□ -0.42
COL11A1-203ENST00000370096 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
COL11A1-203ENST00000370096 ACTN4O43707 911 aaKnown RBP12.4□□□□□ -0.42
COL11A1-203ENST00000370096 RFC4P35249 363 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 CYP26C1Q6V0L0 522 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 FNBP1Q96RU3 617 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 MRPL46Q9H2W6 279 aaKnown RBP12.4□□□□□ -0.42
COL11A1-203ENST00000370096 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 SPECC1L-ADORA2AF8WAN1 911 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 MX2P20592 715 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 RBSNQ9H1K0 784 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 STX10O60499 249 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 PDE1AP54750 535 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
COL11A1-203ENST00000370096 VEZTQ9HBM0 779 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 BACH1O14867 736 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 KRT15P19012 456 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 MAP2K2P36507 400 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 PRPF31Q8WWY3 499 aaKnown RBP12.4□□□□□ -0.42
COL11A1-203ENST00000370096 C9orf84Q5VXU9 1444 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 PLEKHH2Q8IVE3 1493 aa12.4□□□□□ -0.42
COL11A1-203ENST00000370096 CCDC169A6NNP5 214 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 TBC1D8BQ0IIM8 1120 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC152Q4G0S7 254 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 NXNQ6DKJ4 435 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 RUFY3Q7L099 469 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 TBC1D7Q9P0N9 293 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 RIPOR2Q9Y4F9 1068 aa12.4□□□□□ -0.43
COL11A1-203ENST00000370096 PDE4DQ08499 809 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 LETM2Q2VYF4 491 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 SV2BQ7L1I2 683 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 ANKFY1Q9P2R3 1169 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 CAPN7Q9Y6W3 813 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 CEP104O60308 925 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC117Q8IWD4 279 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-203ENST00000370096 PAG1Q9NWQ8 432 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.39□□□□□ -0.43
COL11A1-203ENST00000370096 CPA1P15085 419 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 ST5P78524 1137 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.39□□□□□ -0.43
COL11A1-203ENST00000370096 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 MGEA5O60502 916 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 CCNT1O60563 726 aaKnown RBP12.39□□□□□ -0.43
COL11A1-203ENST00000370096 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 ANKLE2Q86XL3 938 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 UBL4BQ8N7F7 174 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 MYO1AQ9UBC5 1043 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 DHX29Q7Z478 1369 aaKnown RBP12.39□□□□□ -0.43
COL11A1-203ENST00000370096 DTNBO60941 627 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 RAB3GAP1Q15042 981 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 BSPRYQ5W0U4 402 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 MYL5Q02045 173 aa12.39□□□□□ -0.43
COL11A1-203ENST00000370096 HFM1A2PYH4 1435 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 NBPF6Q5VWK0 638 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 CREB3L3Q68CJ9 461 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 NBPF4Q96M43 638 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 FBLN1P23142 703 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 RNF168Q8IYW5 571 aaPredicted RBP12.38□□□□□ -0.43
COL11A1-203ENST00000370096 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 RTL9Q8NET4 1388 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 STMN1P16949 149 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 GNAQP50148 359 aa12.38□□□□□ -0.43
COL11A1-203ENST00000370096 TTC19Q6DKK2 380 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms