RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 MCUR1Q96AQ8 359 aa13.94□□□□□ -0.18
HCFC1-202ENST00000369984 NAPGQ99747 312 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 CACYBPQ9HB71 228 aaKnown RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 RPL13P26373 211 aaKnown RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 AK2P54819 239 aa13.94□□□□□ -0.18
HCFC1-202ENST00000369984 NMIQ13287 307 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
HCFC1-202ENST00000369984 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 CYP26C1Q6V0L0 522 aa13.94□□□□□ -0.18
HCFC1-202ENST00000369984 RBM28Q9NW13 759 aaKnown RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 IQSEC3Q9UPP2 1182 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-202ENST00000369984 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 PROCA1Q8NCQ7 364 aaPredicted RBP13.93□□□□□ -0.18
HCFC1-202ENST00000369984 SPOPO43791 374 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 INPP5BP32019 993 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 RNASE9P60153 205 aaKnown RBP13.93□□□□□ -0.18
HCFC1-202ENST00000369984 CCDC89Q8N998 374 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 MEIS3Q99687 375 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 TSNAXIP1Q2TAA8 658 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
HCFC1-202ENST00000369984 VWA3AA6NCI4 1184 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 WDR44Q5JSH3 913 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 ZNF804AQ7Z570 1209 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 AFAP1L2Q8N4X5 818 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 NOC4LQ9BVI4 516 aaKnown RBP13.93□□□□□ -0.18
HCFC1-202ENST00000369984 VCXQ9H320 206 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 TAF12Q16514 161 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 IQUBQ8NA54 791 aa13.93□□□□□ -0.18
HCFC1-202ENST00000369984 OGFOD1Q8N543 542 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 HDAC9Q9UKV0 1011 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 USH1CQ9Y6N9 552 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 CTTNBP2Q8WZ74 1663 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 TNNI2P48788 182 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 PSMD6Q15008 389 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 SETDB2Q96T68 719 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 WASLO00401 505 aaPredicted RBP13.92□□□□□ -0.18
HCFC1-202ENST00000369984 CREB3L3Q68CJ9 461 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 STX10O60499 249 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 NCOA1Q15788 1441 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 CCNT1O60563 726 aaKnown RBP13.92□□□□□ -0.18
HCFC1-202ENST00000369984 SV2BQ7L1I2 683 aa13.92□□□□□ -0.18
HCFC1-202ENST00000369984 A0A1B0GVL5 298 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 A6NNZ2 444 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 B4DLN1 442 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
HCFC1-202ENST00000369984 TRIM14Q14142 442 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 LRRC43Q8N309 656 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 IGSF22Q8N9C0 903 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 ERO1AQ96HE7 468 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 FAM204AQ9H8W3 233 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 GIPC1O14908 333 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 HGSO14964 777 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-202ENST00000369984 FOXO3O43524 673 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 PHLDB2Q86SQ0 1253 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 STK10O94804 968 aaKnown RBP13.91□□□□□ -0.18
HCFC1-202ENST00000369984 MYL5Q02045 173 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 RXRAP19793 462 aa13.91□□□□□ -0.18
HCFC1-202ENST00000369984 SMAP1Q8IYB5 467 aaPredicted RBP13.91□□□□□ -0.18
HCFC1-202ENST00000369984 RAB3IPQ96QF0 476 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-202ENST00000369984 TRAF5O00463 557 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 MGEA5O60502 916 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 ANXA1P04083 346 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 CNNM4Q6P4Q7 775 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 CCDC117Q8IWD4 279 aaPredicted RBP13.9□□□□□ -0.18
HCFC1-202ENST00000369984 PTPDC1A2A3K4 754 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 I3L4J1 428 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 PLCB1Q9NQ66 1216 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 CETN3O15182 167 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 MAP3K1Q13233 1512 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 TUBB2AQ13885 445 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 TUBB2BQ9BVA1 445 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 ATP6V1E1P36543 226 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 ARHGAP24Q8N264 748 aa13.9□□□□□ -0.18
HCFC1-202ENST00000369984 SNAPC4Q5SXM2 1469 aa13.9□□□□□ -0.19
HCFC1-202ENST00000369984 TTC41PQ6P2S7 1318 aa13.9□□□□□ -0.19
HCFC1-202ENST00000369984 GOLGA6BA6NDN3 693 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 GIGYF1O75420 1035 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ATL3Q6DD88 541 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ASIC2Q16515 512 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 RNF10Q8N5U6 811 aaKnown RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ZKSCAN3Q9BRR0 538 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 DAPK3O43293 454 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 XAB2Q9HCS7 855 aaKnown RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 TXNDC9O14530 226 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 CALUO43852 315 aaPredicted RBP13.89□□□□□ -0.19
HCFC1-202ENST00000369984 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 SLC8A3P57103 927 aa13.89□□□□□ -0.19
HCFC1-202ENST00000369984 SH2D4BQ5SQS7 431 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms