RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 EAF2Q96CJ1 260 aaPredicted RBP25.29■■□□□ 1.64
SMNDC1-201ENST00000369592 CSRNP1Q96S65 589 aa25.29■■□□□ 1.64
SMNDC1-201ENST00000369592 DBNLQ9UJU6 430 aaKnown RBP25.29■■□□□ 1.64
SMNDC1-201ENST00000369592 CA12O43570 354 aa25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 UQCRFS1P1P0C7P4 283 aa25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 PRKG1Q13976 671 aa25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 CDC42EP5Q6NZY7 148 aa25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 EXOC6BQ9Y2D4 811 aa25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 RPAP1Q9BWH6 1393 aaPredicted RBP25.28■■□□□ 1.64
SMNDC1-201ENST00000369592 PPP1R12BO60237 982 aaPredicted RBP25.27■■□□□ 1.64
SMNDC1-201ENST00000369592 TNNI2P48788 182 aa25.27■■□□□ 1.64
SMNDC1-201ENST00000369592 GORABQ5T7V8 394 aa25.27■■□□□ 1.64
SMNDC1-201ENST00000369592 MCOLN1Q9GZU1 580 aa25.27■■□□□ 1.64
SMNDC1-201ENST00000369592 RFX7Q2KHR2 1363 aa25.27■■□□□ 1.64
SMNDC1-201ENST00000369592 SPTY2D1Q68D10 685 aaPredicted RBP25.26■■□□□ 1.63
SMNDC1-201ENST00000369592 REM2Q8IYK8 340 aaPredicted RBP25.26■■□□□ 1.63
SMNDC1-201ENST00000369592 TLR7Q9NYK1 1049 aaKnown RBP25.26■■□□□ 1.63
SMNDC1-201ENST00000369592 MYO5AQ9Y4I1 1855 aaKnown RBP25.26■■□□□ 1.63
SMNDC1-201ENST00000369592 ERC1Q8IUD2 1116 aa25.25■■□□□ 1.63
SMNDC1-201ENST00000369592 CLMNQ96JQ2 1002 aa25.25■■□□□ 1.63
SMNDC1-201ENST00000369592 ABCF2Q9UG63 623 aa25.25■■□□□ 1.63
SMNDC1-201ENST00000369592 MECOMQ03112 1051 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 NFIAQ12857 509 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 SPRYD7Q5W111 196 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 TBC1D9Q6ZT07 1266 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 SAGE1Q9NXZ1 904 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 TMOD2Q9NZR1 351 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 FAM198AQ9UFP1 575 aa25.24■■□□□ 1.63
SMNDC1-201ENST00000369592 HSP90AB4PQ58FF6 505 aa25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 ERICH6Q7L0X2 663 aa25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 RHPN1Q8TCX5 695 aa25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 FAM151AQ8WW52 585 aa25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 NSUN4Q96CB9 384 aaKnown RBP25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 CCDC8Q9H0W5 538 aaPredicted RBP25.23■■□□□ 1.63
SMNDC1-201ENST00000369592 MROH7-TTC4A0A0A0MT08 1334 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 GPR75-ASB3A0A0A6YYF3 556 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 IREB2P48200 963 aaKnown RBP25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 TM4SF4P48230 202 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 CCDC158Q5M9N0 1113 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 DZIP1Q86YF9 867 aaKnown RBP25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 IDI2Q9BXS1 227 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 USP40Q9NVE5 1235 aa25.22■■□□□ 1.63
SMNDC1-201ENST00000369592 HMMRO75330 724 aa25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 CYP2E1P05181 493 aaPredicted RBP25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 ANKRD13AQ8IZ07 590 aa25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 RNF186Q9NXI6 227 aa25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 CASP8AP2Q9UKL3 1982 aa25.21■■□□□ 1.63
SMNDC1-201ENST00000369592 RHBDL3P58872 404 aa25.2■■□□□ 1.62
SMNDC1-201ENST00000369592 TTC39AQ5SRH9 613 aa25.2■■□□□ 1.62
SMNDC1-201ENST00000369592 SLF2Q8IX21 1173 aa25.2■■□□□ 1.62
SMNDC1-201ENST00000369592 SLC10A4Q96EP9 437 aa25.2■■□□□ 1.62
SMNDC1-201ENST00000369592 MAST2Q6P0Q8 1798 aa25.2■■□□□ 1.62
SMNDC1-201ENST00000369592 IGSF3O75054 1194 aa25.19■■□□□ 1.62
SMNDC1-201ENST00000369592 WDHD1O75717 1129 aaPredicted RBP25.19■■□□□ 1.62
SMNDC1-201ENST00000369592 GJA5P36382 358 aa25.19■■□□□ 1.62
SMNDC1-201ENST00000369592 WNK4Q96J92 1243 aa25.19■■□□□ 1.62
SMNDC1-201ENST00000369592 SNRKQ9NRH2 765 aa25.19■■□□□ 1.62
SMNDC1-201ENST00000369592 ATRNL1Q5VV63 1379 aa25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 ZBTB48P10074 688 aaPredicted RBP25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 DGKZQ13574 1117 aa25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 ZFPM1Q8IX07 1006 aa25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 KIF1BPQ96EK5 621 aa25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 AK9Q5TCS8 1911 aa25.18■■□□□ 1.62
SMNDC1-201ENST00000369592 DOCK2Q92608 1830 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 RAB11FIP3O75154 756 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 ENTPD3O75355 529 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 BTDP43251 543 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 ZAP70P43403 619 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 MAP3K9P80192 1104 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 AACSQ86V21 672 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 IL1RAPL2Q9NP60 686 aa25.17■■□□□ 1.62
SMNDC1-201ENST00000369592 NPM3O75607 178 aaKnown RBP25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 MAP4K4O95819 1239 aaPredicted RBP25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 LDHCP07864 332 aa25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 RRP1P56182 461 aaKnown RBP25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 SH3BP5LQ7L8J4 393 aa25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 HOOK2Q96ED9 719 aa25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 ZNF112Q9UJU3 913 aa25.16■■□□□ 1.62
SMNDC1-201ENST00000369592 TRPA1O75762 1119 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 RGS3P49796 1198 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 GSTO1P78417 241 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 MAP3K10Q02779 954 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 TCP10Q12799 353 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 VGLL4Q14135 290 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 YTHDC1Q96MU7 727 aaKnown RBP25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 DDX4Q9NQI0 724 aaKnown RBP25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 PIH1D3Q9NQM4 214 aaKnown RBP25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 RAI14Q9P0K7 980 aa25.15■■□□□ 1.62
SMNDC1-201ENST00000369592 PDE4DIPQ5VU43 2346 aa25.14■■□□□ 1.62
SMNDC1-201ENST00000369592 MKRN3Q13064 507 aaKnown RBP25.14■■□□□ 1.62
SMNDC1-201ENST00000369592 CFHR5Q9BXR6 569 aa25.14■■□□□ 1.62
SMNDC1-201ENST00000369592 LRP2BPQ9P2M1 347 aa25.14■■□□□ 1.62
SMNDC1-201ENST00000369592 CDK5RAP2Q96SN8 1893 aa25.14■■□□□ 1.61
SMNDC1-201ENST00000369592 TESPA1A2RU30 521 aaPredicted RBP25.13■■□□□ 1.61
SMNDC1-201ENST00000369592 MANSC4A6NHS7 340 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms