RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SBF1O95248 1867 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 MYH2Q9UKX2 1941 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 FOXP2O15409 715 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 USP17L8P0C7I0 530 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 TBC1D32Q96NH3 1257 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 DSCC1Q9BVC3 393 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 MRIQ9BWK5 157 aa13.1□□□□□ -0.31
BRCC3-204ENST00000369462 RBM8AQ9Y5S9 174 aaKnown RBP13.1□□□□□ -0.31
BRCC3-204ENST00000369462 ZNF646O15015 1829 aaPredicted RBP13.09□□□□□ -0.31
BRCC3-204ENST00000369462 PPP4CP60510 307 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
BRCC3-204ENST00000369462 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 SERPINA10Q9UK55 444 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 PSME4Q14997 1843 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 MAST2Q6P0Q8 1798 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
BRCC3-204ENST00000369462 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
BRCC3-204ENST00000369462 GNAT2P19087 354 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 SH3RF3Q8TEJ3 882 aaPredicted RBP13.09□□□□□ -0.31
BRCC3-204ENST00000369462 HDAC9Q9UKV0 1011 aa13.09□□□□□ -0.31
BRCC3-204ENST00000369462 GSG1L2A8MUP6 293 aa13.08□□□□□ -0.31
BRCC3-204ENST00000369462 FGAP02671 866 aa13.08□□□□□ -0.31
BRCC3-204ENST00000369462 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.31
BRCC3-204ENST00000369462 APOBEC3HQ6NTF7 200 aaKnown RBP13.08□□□□□ -0.31
BRCC3-204ENST00000369462 ZDHHC15Q96MV8 337 aa13.08□□□□□ -0.31
BRCC3-204ENST00000369462 CRNKL1Q9BZJ0 848 aaKnown RBP13.08□□□□□ -0.31
BRCC3-204ENST00000369462 MCCP23508 829 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 RPS12P25398 132 aaKnown RBP13.08□□□□□ -0.32
BRCC3-204ENST00000369462 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
BRCC3-204ENST00000369462 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 PLCG2P16885 1265 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 HSPA4P34932 840 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 RBM25P49756 843 aaKnown RBP13.08□□□□□ -0.32
BRCC3-204ENST00000369462 NECTIN1Q15223 517 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 GPC2Q8N158 579 aa13.08□□□□□ -0.32
BRCC3-204ENST00000369462 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
BRCC3-204ENST00000369462 RHBDL3P58872 404 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 CERS3Q8IU89 383 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 DPF2Q92785 391 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 NACAP1Q9BZK3 213 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 EPB41L4AQ9HCS5 686 aaPredicted RBP13.07□□□□□ -0.32
BRCC3-204ENST00000369462 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 TEX11Q8IYF3 940 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
BRCC3-204ENST00000369462 NAPBQ9H115 298 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 USP40Q9NVE5 1235 aa13.07□□□□□ -0.32
BRCC3-204ENST00000369462 DDNO94850 711 aaPredicted RBP13.06□□□□□ -0.32
BRCC3-204ENST00000369462 USP5P45974 858 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 TDO2P48775 406 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 DLGAP5Q15398 846 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 CREB3L3Q68CJ9 461 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 MICALL2Q8IY33 904 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 CTNNA3Q9UI47 895 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
BRCC3-204ENST00000369462 CDC42EP5Q6NZY7 148 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
BRCC3-204ENST00000369462 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 SLC27A2O14975 620 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 ALX1Q15699 326 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 RNF20Q5VTR2 975 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
BRCC3-204ENST00000369462 MYOZ2Q9NPC6 264 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 DCP1AQ9NPI6 582 aaPredicted RBP13.05□□□□□ -0.32
BRCC3-204ENST00000369462 ATP8A2Q9NTI2 1148 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 ADAMTSL1Q8N6G6 1762 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 CYP21A2P08686 494 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
BRCC3-204ENST00000369462 HAND2P61296 217 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
BRCC3-204ENST00000369462 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
BRCC3-204ENST00000369462 TAF6LQ9Y6J9 622 aa13.05□□□□□ -0.32
BRCC3-204ENST00000369462 RPAP1Q9BWH6 1393 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-204ENST00000369462 EGFRP00533 1210 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 CACNB3P54284 484 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 ZNF280AP59817 542 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-204ENST00000369462 IMMTQ16891 758 aaKnown RBP13.04□□□□□ -0.32
BRCC3-204ENST00000369462 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 ZNF213O14771 459 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 WDHD1O75717 1129 aaPredicted RBP13.04□□□□□ -0.32
BRCC3-204ENST00000369462 PICALMQ13492 652 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
BRCC3-204ENST00000369462 USP17L12C9JPN9 530 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 USP17L21D6R901 530 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 H7C1D1 291 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 KIF2CQ99661 725 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 GPRC5DQ9NZD1 345 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 MKRN1Q9UHC7 482 aaKnown RBP13.03□□□□□ -0.32
BRCC3-204ENST00000369462 MINDY4BA8MYZ0 360 aa13.03□□□□□ -0.32
BRCC3-204ENST00000369462 WNT10BO00744 389 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms