RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CTU1Q7Z7A3 348 aaKnown RBP8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 C2CD5Q86YS7 1000 aa8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 ZNF594Q96JF6 807 aaPredicted RBP8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 AAASQ9NRG9 546 aa8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 MAP3K19Q56UN5 1328 aa8.44□□□□□ -1.06
ECHDC1-202ENST00000368289 ST20-MTHFSA0A0A6YYL1 179 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 A0A1W2PRU2 124 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 FAM155AB1AL88 458 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 M0R2N6 131 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 INHAP05111 366 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 BMP2P12643 396 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 NFIXQ14938 502 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 XAGE2Q96GT9 111 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 AGBL1Q96MI9 1066 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 CENPJQ9HC77 1338 aaPredicted RBP8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 AFDNP55196 1824 aaKnown RBP8.43□□□□□ -1.06
ECHDC1-202ENST00000368289 SPINT1O43278 529 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 GPC1P35052 558 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 DPYDQ12882 1025 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 CLN3Q13286 438 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 CCDC184Q52MB2 194 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 PNMA8AQ86V59 439 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 NGEFQ8N5V2 710 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 C7orf43Q8WVR3 580 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 CNKSR1Q969H4 720 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 ZNF395Q9H8N7 513 aaPredicted RBP8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 ETNK1Q9HBU6 452 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 RNF186Q9NXI6 227 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 CGNL1Q0VF96 1302 aa8.42□□□□□ -1.06
ECHDC1-202ENST00000368289 COL5A3P25940 1745 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 MON2Q7Z3U7 1717 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 NPC1L1Q9UHC9 1359 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 MEN1O00255 615 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 TRPA1O75762 1119 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 C6orf118Q5T5N4 469 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 DLK2Q6UY11 383 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 KDF1Q8NAX2 398 aaPredicted RBP8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 HHIPL1Q96JK4 782 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 KIAA1024Q9UPX6 916 aa8.41□□□□□ -1.06
ECHDC1-202ENST00000368289 COL4A5P29400 1685 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 EPS15P42566 896 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 SCNN1DP51172 638 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 USPL1Q5W0Q7 1092 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 INTS5Q6P9B9 1019 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 OLFM4Q6UX06 510 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 SYNE4Q8N205 404 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 POLMQ9NP87 494 aaPredicted RBP8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 ZNF358Q9NW07 568 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 RAPGEFL1Q9UHV5 662 aa8.4□□□□□ -1.06
ECHDC1-202ENST00000368289 PIEZO1Q92508 2521 aa8.4□□□□□ -1.07
ECHDC1-202ENST00000368289 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.07
ECHDC1-202ENST00000368289 TRPM7Q96QT4 1865 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 SLX4Q8IY92 1834 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 FZD9O00144 591 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 ST8SIA5O15466 376 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 CELF2O95319 508 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 TATP17735 454 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 TRIM46Q7Z4K8 759 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 RAPGEF4Q8WZA2 1011 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 KIFC2Q96AC6 838 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 SAGE1Q9NXZ1 904 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 TMOD3Q9NYL9 352 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 USTQ9Y2C2 406 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 CDH23Q9H251 3354 aa8.39□□□□□ -1.07
ECHDC1-202ENST00000368289 COL11A2P13942 1736 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 SFI1A8K8P3 1242 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 H0YIN7 160 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 DKK1O94907 266 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 IL2RAP01589 272 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 SERPINB2P05120 415 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 BMP1P13497 986 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 SMTNP53814 917 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 CENPCQ03188 943 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 ZFP42Q96MM3 310 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 INSM2Q96T92 566 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 PRO3102Q9H379 93 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 ZNF277Q9NRM2 450 aaPredicted RBP8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 ANKRD31Q8N7Z5 1873 aa8.38□□□□□ -1.07
ECHDC1-202ENST00000368289 CACNA1SQ13698 1873 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 H0YGN5 161 aa8.37□□□□□ -1.07
ECHDC1-202ENST00000368289 SOX1O00570 391 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms