RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 TRIM6-TRIM34B2RNG4 842 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 GOLIM4O00461 696 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 IGSF3O75054 1194 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 MAP4K4O95819 1239 aaPredicted RBP15.4■□□□□ 0.06
LMX1A-203ENST00000367893 SLC10A3P09131 477 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
LMX1A-203ENST00000367893 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 CERS5Q8N5B7 392 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 WDR66Q8TBY9 1149 aa15.4■□□□□ 0.06
LMX1A-203ENST00000367893 FRAT2O75474 233 aaPredicted RBP15.39■□□□□ 0.05
LMX1A-203ENST00000367893 MMP14P50281 582 aa15.39■□□□□ 0.05
LMX1A-203ENST00000367893 GTF2IP78347 998 aa15.39■□□□□ 0.05
LMX1A-203ENST00000367893 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
LMX1A-203ENST00000367893 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
LMX1A-203ENST00000367893 PIH1D3Q9NQM4 214 aaKnown RBP15.39■□□□□ 0.05
LMX1A-203ENST00000367893 MAST2Q6P0Q8 1798 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 ZNF157P51786 506 aaPredicted RBP15.38■□□□□ 0.05
LMX1A-203ENST00000367893 FKBP1AP62942 108 aaKnown RBP15.38■□□□□ 0.05
LMX1A-203ENST00000367893 FKBP1BP68106 108 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 KIF23Q02241 960 aaPredicted RBP15.38■□□□□ 0.05
LMX1A-203ENST00000367893 PRAMEF18Q5VWM3 479 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 ZGPATQ8N5A5 531 aaKnown RBP15.38■□□□□ 0.05
LMX1A-203ENST00000367893 TBC1D22AQ8WUA7 517 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
LMX1A-203ENST00000367893 TBC1D9Q6ZT07 1266 aa15.37■□□□□ 0.05
LMX1A-203ENST00000367893 MOB2Q70IA6 237 aa15.37■□□□□ 0.05
LMX1A-203ENST00000367893 RASAL3Q86YV0 1011 aa15.37■□□□□ 0.05
LMX1A-203ENST00000367893 CDC45O75419 566 aa15.36■□□□□ 0.05
LMX1A-203ENST00000367893 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
LMX1A-203ENST00000367893 TMED8Q6PL24 325 aaPredicted RBP15.36■□□□□ 0.05
LMX1A-203ENST00000367893 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
LMX1A-203ENST00000367893 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
LMX1A-203ENST00000367893 CHMLP26374 656 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
LMX1A-203ENST00000367893 MTMR14Q8NCE2 650 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 CSRNP1Q96S65 589 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 SAGE1Q9NXZ1 904 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 PCDHAC2Q9Y5I4 1007 aa15.35■□□□□ 0.05
LMX1A-203ENST00000367893 PAPPA2Q9BXP8 1791 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 HIP1O00291 1037 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
LMX1A-203ENST00000367893 ADD2P35612 726 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 LRRFIP1Q32MZ4 808 aaKnown RBP15.34■□□□□ 0.05
LMX1A-203ENST00000367893 MFSD14BQ5SR56 506 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.05
LMX1A-203ENST00000367893 RNF186Q9NXI6 227 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
LMX1A-203ENST00000367893 TCRBV5S4A2TA0A5A2 114 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 UBE2Q2LH0YL09 131 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.04
LMX1A-203ENST00000367893 IDH1O75874 414 aaKnown RBP15.33■□□□□ 0.04
LMX1A-203ENST00000367893 PRDX5P30044 214 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 GRIK5Q16478 980 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 ERICH6Q7L0X2 663 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 ZNF384Q8TF68 577 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 NSUN4Q96CB9 384 aaKnown RBP15.33■□□□□ 0.04
LMX1A-203ENST00000367893 LRP2BPQ9P2M1 347 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 ABCF2Q9UG63 623 aa15.33■□□□□ 0.04
LMX1A-203ENST00000367893 POLR2AP24928 1970 aaKnown RBP15.33■□□□□ 0.04
LMX1A-203ENST00000367893 MYH2Q9UKX2 1941 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 CHGBP05060 677 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 LDHBP07195 334 aaKnown RBP15.32■□□□□ 0.04
LMX1A-203ENST00000367893 PDE6AP16499 860 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 ZMYM1Q5SVZ6 1142 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 APOBEC3FQ8IUX4 373 aaKnown RBP15.32■□□□□ 0.04
LMX1A-203ENST00000367893 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
LMX1A-203ENST00000367893 SPDYE2BA6NHP3 402 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 TRPA1O75762 1119 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 SPDYE6P0CI01 402 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 MECOMQ03112 1051 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 DLGAP5Q15398 846 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 MRIQ9BWK5 157 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 DIAPH3Q9NSV4 1193 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
LMX1A-203ENST00000367893 A0A0D9SFI3 127 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 NMIQ13287 307 aaPredicted RBP15.3■□□□□ 0.04
LMX1A-203ENST00000367893 CFAP100Q494V2 611 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 CASC1Q6TDU7 716 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 MAGEB6Q8N7X4 407 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 APPBP2Q92624 585 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
LMX1A-203ENST00000367893 PRMT6Q96LA8 375 aaPredicted RBP15.3■□□□□ 0.04
LMX1A-203ENST00000367893 FAM227BQ96M60 508 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 SSC5DA1L4H1 1573 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 RAD50Q92878 1312 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 ZNF532Q9HCE3 1301 aa15.3■□□□□ 0.04
LMX1A-203ENST00000367893 F8W031 263 aaPredicted RBP15.29■□□□□ 0.04
LMX1A-203ENST00000367893 SGSM2O43147 1006 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms