RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 CLRN2A0PK11 232 aa12.48□□□□□ -0.41
NUP43-203ENST00000367404 MYO1BO43795 1136 aa12.48□□□□□ -0.41
NUP43-203ENST00000367404 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
NUP43-203ENST00000367404 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
NUP43-203ENST00000367404 NBPF12Q5TAG4 269 aaPredicted RBP12.48□□□□□ -0.41
NUP43-203ENST00000367404 INTS3Q68E01 1043 aaKnown RBP12.48□□□□□ -0.41
NUP43-203ENST00000367404 HELBQ8NG08 1087 aaPredicted RBP12.48□□□□□ -0.41
NUP43-203ENST00000367404 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
NUP43-203ENST00000367404 CENPFP49454 3210 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
NUP43-203ENST00000367404 VAMP4O75379 141 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 USP2O75604 605 aaPredicted RBP12.47□□□□□ -0.41
NUP43-203ENST00000367404 IREB2P48200 963 aaKnown RBP12.47□□□□□ -0.41
NUP43-203ENST00000367404 RASA3Q14644 834 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 EPHA10Q5JZY3 1008 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 ANKRD13AQ8IZ07 590 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 ARMC5Q96C12 935 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
NUP43-203ENST00000367404 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 ARHGAP33O14559 1287 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 CRHR2Q13324 411 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 PPP4R3BQ5MIZ7 849 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 GCC1Q96CN9 775 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 PTPN18Q99952 460 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 VEZTQ9HBM0 779 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
NUP43-203ENST00000367404 F6X3S4 739 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 CAP1Q01518 475 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 TNFAIP1Q13829 316 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 OTUD7BQ6GQQ9 843 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 TDRD7Q8NHU6 1098 aaKnown RBP12.45□□□□□ -0.42
NUP43-203ENST00000367404 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 TEPSINQ96N21 525 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 SERPINA10Q9UK55 444 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 JAG2Q9Y219 1238 aa12.45□□□□□ -0.42
NUP43-203ENST00000367404 RBBP6Q7Z6E9 1792 aaKnown RBP12.44□□□□□ -0.42
NUP43-203ENST00000367404 GRM8O00222 908 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 UBE4AQ14139 1066 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 LDHAL6AQ6ZMR3 332 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 WDR63Q8IWG1 891 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 OPTNQ96CV9 577 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 ZNF594Q96JF6 807 aaPredicted RBP12.44□□□□□ -0.42
NUP43-203ENST00000367404 ZNF70Q9UC06 446 aaPredicted RBP12.44□□□□□ -0.42
NUP43-203ENST00000367404 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
NUP43-203ENST00000367404 OTOFQ9HC10 1997 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 ARAP2Q8WZ64 1704 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 SP3Q02447 781 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
NUP43-203ENST00000367404 MFSD14BQ5SR56 506 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
NUP43-203ENST00000367404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP43-203ENST00000367404 ELP3Q9H9T3 547 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 EFCC1Q9HA90 598 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
NUP43-203ENST00000367404 ALDH1L1O75891 902 aa12.42□□□□□ -0.42
NUP43-203ENST00000367404 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 PSEN2P49810 448 aa12.42□□□□□ -0.42
NUP43-203ENST00000367404 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
NUP43-203ENST00000367404 TAF7LQ5H9L4 462 aa12.42□□□□□ -0.42
NUP43-203ENST00000367404 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
NUP43-203ENST00000367404 ZNF333Q96JL9 665 aa12.42□□□□□ -0.42
NUP43-203ENST00000367404 FAM84BQ96KN1 310 aaPredicted RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 TDRD3Q9H7E2 651 aaKnown RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 TTF2Q9UNY4 1162 aaKnown RBP12.42□□□□□ -0.42
NUP43-203ENST00000367404 PLIN1O60240 522 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 CRKP46108 304 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 GYG1P46976 350 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 VGLL4Q14135 290 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 HABP4Q5JVS0 413 aaKnown RBP12.41□□□□□ -0.42
NUP43-203ENST00000367404 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 KAZALD1Q96I82 304 aa12.41□□□□□ -0.42
NUP43-203ENST00000367404 UTYO14607 1347 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 EVI5O60447 810 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 GTF2A2P52657 109 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 HDLBPQ00341 1268 aaKnown RBP12.4□□□□□ -0.42
NUP43-203ENST00000367404 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
NUP43-203ENST00000367404 TMEM39BQ9GZU3 492 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 RIPOR2Q9Y4F9 1068 aa12.4□□□□□ -0.42
NUP43-203ENST00000367404 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 CCL15-CCL14A0A0B4J2E2 113 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 TCP10L2B9ZVM9 353 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 EN2P19622 333 aaPredicted RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 TNNI2P48788 182 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 MAP3K9P80192 1104 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 TAF1CQ15572 869 aaPredicted RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 GRIK5Q16478 980 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 CCL15Q16663 113 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
NUP43-203ENST00000367404 ADGRD1Q6QNK2 874 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 FBXO33Q7Z6M2 555 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 FAM43AQ8N2R8 423 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
NUP43-203ENST00000367404 SPRYD3Q8NCJ5 442 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms