RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 DNAJC10Q8IXB1 793 aa22.59■■□□□ 1.21
TRIM58-201ENST00000366481 KIF28PB7ZC32 967 aa22.58■■□□□ 1.21
TRIM58-201ENST00000366481 PAXIP1Q6ZW49 1069 aaPredicted RBP22.58■■□□□ 1.21
TRIM58-201ENST00000366481 CADPS2Q86UW7 1296 aa22.58■■□□□ 1.21
TRIM58-201ENST00000366481 GOLGA6L1Q8N7Z2 621 aa22.58■■□□□ 1.21
TRIM58-201ENST00000366481 KIAA1468Q9P260 1216 aa22.58■■□□□ 1.21
TRIM58-201ENST00000366481 EFCAB8A8MWE9 144 aa22.58■■□□□ 1.2
TRIM58-201ENST00000366481 SASH3O75995 380 aa22.58■■□□□ 1.2
TRIM58-201ENST00000366481 ZRANB2O95218 330 aaKnown RBP eCLIP22.58■■□□□ 1.2
TRIM58-201ENST00000366481 TOP1P11387 765 aaKnown RBP22.58■■□□□ 1.2
TRIM58-201ENST00000366481 IMMTQ16891 758 aaKnown RBP22.57■■□□□ 1.2
TRIM58-201ENST00000366481 RALYLQ86SE5 291 aaKnown RBP22.57■■□□□ 1.2
TRIM58-201ENST00000366481 CCDC82Q8N4S0 544 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 PHKBQ93100 1093 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 LLPHQ9BRT6 129 aaKnown RBP22.57■■□□□ 1.2
TRIM58-201ENST00000366481 SRRTQ9BXP5 876 aaKnown RBP22.57■■□□□ 1.2
TRIM58-201ENST00000366481 VPS18Q9P253 973 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 METTL24Q5JXM2 366 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 GPAA1O43292 621 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 TADA3O75528 432 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 TOMM22Q9NS69 142 aa22.57■■□□□ 1.2
TRIM58-201ENST00000366481 ZSCAN12O43309 604 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 CC2D1AQ6P1N0 951 aaPredicted RBP22.56■■□□□ 1.2
TRIM58-201ENST00000366481 ANTXR2P58335 489 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 PPP2R3AQ06190 1150 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 HLFQ16534 295 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 MICU3Q86XE3 530 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 ADAM21Q9UKJ8 722 aa22.56■■□□□ 1.2
TRIM58-201ENST00000366481 GTF2A1P52655 376 aaPredicted RBP22.55■■□□□ 1.2
TRIM58-201ENST00000366481 SYNE3Q6ZMZ3 975 aa22.55■■□□□ 1.2
TRIM58-201ENST00000366481 ENGASEQ8NFI3 743 aa22.55■■□□□ 1.2
TRIM58-201ENST00000366481 TBC1D8O95759 1140 aa22.55■■□□□ 1.2
TRIM58-201ENST00000366481 LDHAL6AQ6ZMR3 332 aa22.55■■□□□ 1.2
TRIM58-201ENST00000366481 IFIT5Q13325 482 aaKnown RBP22.55■■□□□ 1.2
TRIM58-201ENST00000366481 GREM2Q9H772 168 aa22.55■■□□□ 1.2
TRIM58-201ENST00000366481 PHACTR2O75167 634 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 KARSQ15046 597 aaKnown RBP22.54■■□□□ 1.2
TRIM58-201ENST00000366481 SLC9C2Q5TAH2 1124 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 PARD6BQ9BYG5 372 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 ZNF213O14771 459 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 SPECC1Q5M775 1068 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 HPS5Q9UPZ3 1129 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 PHLPP2Q6ZVD8 1323 aa22.54■■□□□ 1.2
TRIM58-201ENST00000366481 TUBB4AP04350 444 aa22.53■■□□□ 1.2
TRIM58-201ENST00000366481 RRP15Q9Y3B9 282 aaKnown RBP22.53■■□□□ 1.2
TRIM58-201ENST00000366481 MRC1P22897 1456 aa22.53■■□□□ 1.2
TRIM58-201ENST00000366481 ANKRD65E5RJM6 399 aa22.53■■□□□ 1.2
TRIM58-201ENST00000366481 MCAMP43121 646 aa22.53■■□□□ 1.2
TRIM58-201ENST00000366481 NOM1Q5C9Z4 860 aaKnown RBP22.53■■□□□ 1.2
TRIM58-201ENST00000366481 SALL1Q9NSC2 1324 aa22.53■■□□□ 1.2
TRIM58-201ENST00000366481 CCDC12Q8WUD4 166 aaPredicted RBP22.53■■□□□ 1.2
TRIM58-201ENST00000366481 ZNF274Q96GC6 653 aaPredicted RBP22.53■■□□□ 1.2
TRIM58-201ENST00000366481 PUF60Q9UHX1 559 aaKnown RBP22.53■■□□□ 1.2
TRIM58-201ENST00000366481 B4E1Z4 1266 aa22.52■■□□□ 1.2
TRIM58-201ENST00000366481 LINC00301Q8NCQ3 95 aa22.52■■□□□ 1.2
TRIM58-201ENST00000366481 FMR1NBQ8N0W7 255 aaPredicted RBP22.52■■□□□ 1.2
TRIM58-201ENST00000366481 SIPA1L3O60292 1781 aaPredicted RBP22.52■■□□□ 1.2
TRIM58-201ENST00000366481 SPTLC2O15270 562 aa22.52■■□□□ 1.19
TRIM58-201ENST00000366481 TCIRG1Q13488 830 aa22.52■■□□□ 1.19
TRIM58-201ENST00000366481 GPR161Q8N6U8 529 aaKnown RBP22.52■■□□□ 1.19
TRIM58-201ENST00000366481 AGXT2Q9BYV1 514 aa22.52■■□□□ 1.19
TRIM58-201ENST00000366481 AFDNP55196 1824 aaKnown RBP22.51■■□□□ 1.19
TRIM58-201ENST00000366481 CMTR1Q8N1G2 835 aaKnown RBP22.51■■□□□ 1.19
TRIM58-201ENST00000366481 CCDC102AQ96A19 550 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 CLIC6Q96NY7 704 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 ZNF202O95125 648 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 ATP2B1P20020 1258 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 ITGA6P23229 1130 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 TBC1D10CQ8IV04 446 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 GOLGA5Q8TBA6 731 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 DPF2Q92785 391 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 WDR24Q96S15 920 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 PARP3Q9Y6F1 533 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 SPATA31A3Q5VYP0 1347 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 PCDH11XQ9BZA7 1347 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 PCDH11YQ9BZA8 1340 aa22.51■■□□□ 1.19
TRIM58-201ENST00000366481 MYSM1Q5VVJ2 828 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 FBXO18Q8NFZ0 1043 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 TMOD3Q9NYL9 352 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 CBFA2T2O43439 604 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 DHX8Q14562 1220 aaKnown RBP22.5■■□□□ 1.19
TRIM58-201ENST00000366481 MUM1L1Q5H9M0 696 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 RRP12Q5JTH9 1297 aaKnown RBP22.5■■□□□ 1.19
TRIM58-201ENST00000366481 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 CYB5R4Q7L1T6 521 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 NCOA7Q8NI08 942 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 CHMP4CQ96CF2 233 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 PPP2R2CQ9Y2T4 447 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 LONRF2Q1L5Z9 754 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 ADALQ6DHV7 355 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
TRIM58-201ENST00000366481 ZKSCAN3Q9BRR0 538 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 DESI2Q9BSY9 194 aa22.5■■□□□ 1.19
TRIM58-201ENST00000366481 MST1RQ04912 1400 aa22.49■■□□□ 1.19
TRIM58-201ENST00000366481 WDHD1O75717 1129 aaPredicted RBP22.49■■□□□ 1.19
TRIM58-201ENST00000366481 NLRP12P59046 1061 aa22.49■■□□□ 1.19
TRIM58-201ENST00000366481 TRIM65Q6PJ69 517 aa22.49■■□□□ 1.19
TRIM58-201ENST00000366481 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms