RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 CACNB3P54284 484 aa17.45■□□□□ 0.38
VPS29-201ENST00000360579 C17orf99Q6UX52 265 aa17.45■□□□□ 0.38
VPS29-201ENST00000360579 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
VPS29-201ENST00000360579 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
VPS29-201ENST00000360579 SRRDQ9UH36 339 aa17.45■□□□□ 0.38
VPS29-201ENST00000360579 GRIK5Q16478 980 aa17.44■□□□□ 0.38
VPS29-201ENST00000360579 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
VPS29-201ENST00000360579 SLC4A10Q6U841 1118 aa17.44■□□□□ 0.38
VPS29-201ENST00000360579 ANKRD23Q86SG2 305 aa17.44■□□□□ 0.38
VPS29-201ENST00000360579 IQSEC3Q9UPP2 1182 aaPredicted RBP17.44■□□□□ 0.38
VPS29-201ENST00000360579 TRIOBPQ9H2D6 2365 aa17.44■□□□□ 0.38
VPS29-201ENST00000360579 RANBP2P49792 3224 aaKnown RBP17.43■□□□□ 0.38
VPS29-201ENST00000360579 PSMC4P43686 418 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 APOBEC3HQ6NTF7 200 aaKnown RBP17.43■□□□□ 0.38
VPS29-201ENST00000360579 HHIPL2Q6UWX4 724 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 RAET1EQ8TD07 263 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 DPF3Q92784 378 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 HTATIP2Q9BUP3 242 aa17.43■□□□□ 0.38
VPS29-201ENST00000360579 PDE8BO95263 885 aa17.42■□□□□ 0.38
VPS29-201ENST00000360579 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
VPS29-201ENST00000360579 GRK4P32298 578 aa17.42■□□□□ 0.38
VPS29-201ENST00000360579 TRIM47Q96LD4 638 aa17.42■□□□□ 0.38
VPS29-201ENST00000360579 CPA4Q9UI42 421 aa17.42■□□□□ 0.38
VPS29-201ENST00000360579 KIF16BQ96L93 1317 aa17.42■□□□□ 0.38
VPS29-201ENST00000360579 PDHXO00330 501 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 MTFR1Q15390 333 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 RABL6Q3YEC7 729 aaPredicted RBP17.41■□□□□ 0.38
VPS29-201ENST00000360579 CCDC184Q52MB2 194 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.41■□□□□ 0.38
VPS29-201ENST00000360579 SHISA4Q96DD7 197 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 KCNH4Q9UQ05 1017 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 UTYO14607 1347 aa17.41■□□□□ 0.38
VPS29-201ENST00000360579 GJB1P08034 283 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 NBPF7P0C2Y1 421 aaPredicted RBP17.4■□□□□ 0.38
VPS29-201ENST00000360579 OSBPP22059 807 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 GJA8P48165 433 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 UBXN2AP68543 259 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 MIGA2Q7L4E1 593 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 MYPNQ86TC9 1320 aa17.4■□□□□ 0.38
VPS29-201ENST00000360579 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
VPS29-201ENST00000360579 INPP5BP32019 993 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 BCAMP50895 628 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 VGLL2Q8N8G2 317 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 PARK7Q99497 189 aaKnown RBP17.39■□□□□ 0.37
VPS29-201ENST00000360579 BICC1Q9H694 974 aaKnown RBP17.39■□□□□ 0.37
VPS29-201ENST00000360579 ZNF112Q9UJU3 913 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
VPS29-201ENST00000360579 NR2E3Q9Y5X4 410 aa17.39■□□□□ 0.37
VPS29-201ENST00000360579 CCL5P13501 91 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 CAPN2P17655 700 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 CTGFP29279 349 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 FCGRTP55899 365 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
VPS29-201ENST00000360579 RNF208Q9H0X6 261 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
VPS29-201ENST00000360579 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
VPS29-201ENST00000360579 ADGRA2Q96PE1 1338 aa17.38■□□□□ 0.37
VPS29-201ENST00000360579 ECM2O94769 699 aaPredicted RBP17.37■□□□□ 0.37
VPS29-201ENST00000360579 NOL9Q5SY16 702 aaKnown RBP17.37■□□□□ 0.37
VPS29-201ENST00000360579 UBE2Q1Q7Z7E8 422 aa17.37■□□□□ 0.37
VPS29-201ENST00000360579 SLAIN1Q8ND83 568 aa17.37■□□□□ 0.37
VPS29-201ENST00000360579 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
VPS29-201ENST00000360579 CXCL11O14625 94 aa17.36■□□□□ 0.37
VPS29-201ENST00000360579 ZEB1P37275 1124 aaPredicted RBP17.36■□□□□ 0.37
VPS29-201ENST00000360579 ANKRD44Q8N8A2 993 aa17.36■□□□□ 0.37
VPS29-201ENST00000360579 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
VPS29-201ENST00000360579 BCRP11274 1271 aa17.35■□□□□ 0.37
VPS29-201ENST00000360579 SLC5A1P13866 664 aa17.35■□□□□ 0.37
VPS29-201ENST00000360579 FGFR2P21802 821 aa17.35■□□□□ 0.37
VPS29-201ENST00000360579 PRKCZQ05513 592 aa17.35■□□□□ 0.37
VPS29-201ENST00000360579 MOGSQ13724 837 aa17.35■□□□□ 0.37
VPS29-201ENST00000360579 A0A1W2PPC1 479 aa17.34■□□□□ 0.37
VPS29-201ENST00000360579 FARP2O94887 1054 aaPredicted RBP17.34■□□□□ 0.37
VPS29-201ENST00000360579 TCP10Q12799 353 aa17.34■□□□□ 0.37
VPS29-201ENST00000360579 FASTKD5Q7L8L6 764 aaKnown RBP17.34■□□□□ 0.37
VPS29-201ENST00000360579 U2AF1L4Q8WU68 220 aaKnown RBP17.34■□□□□ 0.37
VPS29-201ENST00000360579 LPIN2Q92539 896 aa17.34■□□□□ 0.37
VPS29-201ENST00000360579 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
VPS29-201ENST00000360579 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.36
VPS29-201ENST00000360579 PRO3102Q9H379 93 aa17.33■□□□□ 0.36
VPS29-201ENST00000360579 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
VPS29-201ENST00000360579 SGPL1O95470 568 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 CYP2C8P10632 490 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 NFIAQ12857 509 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
VPS29-201ENST00000360579 SLC45A1Q9Y2W3 748 aa17.32■□□□□ 0.36
VPS29-201ENST00000360579 PTPRCP08575 1304 aa17.31■□□□□ 0.36
VPS29-201ENST00000360579 EYA2O00167 538 aa17.31■□□□□ 0.36
VPS29-201ENST00000360579 ADCY3O60266 1144 aa17.31■□□□□ 0.36
VPS29-201ENST00000360579 LDHBP07195 334 aaKnown RBP17.31■□□□□ 0.36
VPS29-201ENST00000360579 DIXDC1Q155Q3 683 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms