RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 AKNAD1Q5T1N1 836 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 MKNK2Q9HBH9 465 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 IFNKQ9P0W0 207 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 PYCARDQ9ULZ3 195 aa12.9□□□□□ -0.34
SSU72-202ENST00000359060 NDUFA8P51970 172 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
SSU72-202ENST00000359060 RASGRF1Q13972 1273 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 ADALQ6DHV7 355 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 MTERF4Q7Z6M4 381 aaKnown RBP12.89□□□□□ -0.35
SSU72-202ENST00000359060 PRIMPOLQ96LW4 560 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
SSU72-202ENST00000359060 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 CPDO75976 1380 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 PALLDQ8WX93 1383 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 DIS3L2Q8IYB7 885 aaKnown RBP12.89□□□□□ -0.35
SSU72-202ENST00000359060 TMTC2Q8N394 836 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 RIPOR2Q9Y4F9 1068 aa12.89□□□□□ -0.35
SSU72-202ENST00000359060 RFX7Q2KHR2 1363 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 TPM1P09493 284 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
SSU72-202ENST00000359060 CHRNDQ07001 517 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 C11orf57Q6ZUT1 292 aaPredicted RBP12.88□□□□□ -0.35
SSU72-202ENST00000359060 NLRP5P59047 1200 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.88□□□□□ -0.35
SSU72-202ENST00000359060 CBFA2T2O43439 604 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
SSU72-202ENST00000359060 SMARCC2Q8TAQ2 1214 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
SSU72-202ENST00000359060 YEATS4O95619 227 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 AFMP43652 599 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 LRP10Q7Z4F1 713 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 TBC1D10CQ8IV04 446 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
SSU72-202ENST00000359060 GNPATO15228 680 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 ANKRD20A12PQ8NF67 263 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 CABP5Q9NP86 173 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
SSU72-202ENST00000359060 UBASH3AP57075 661 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 MNS1Q8NEH6 495 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
SSU72-202ENST00000359060 PFKFB1P16118 471 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 CRNKL1Q9BZJ0 848 aaKnown RBP12.87□□□□□ -0.35
SSU72-202ENST00000359060 ZSWIM5Q9P217 1185 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 ZMYM6O95789 1325 aa12.87□□□□□ -0.35
SSU72-202ENST00000359060 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 CTDNEP1O95476 244 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 RTEL1Q9NZ71 1219 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 KIAA1468Q9P260 1216 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 BTBD18B2RXH4 712 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 RFC4P35249 363 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 TXLNAP40222 546 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 GSDMDP57764 484 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
SSU72-202ENST00000359060 NEMFO60524 1076 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 CSF1RP07333 972 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 ATP2B2Q01814 1243 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 MB21D2Q8IYB1 491 aaPredicted RBP12.86□□□□□ -0.35
SSU72-202ENST00000359060 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 DENND2AQ9ULE3 1009 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
SSU72-202ENST00000359060 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SSU72-202ENST00000359060 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
SSU72-202ENST00000359060 MCM9Q9NXL9 1143 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 AATFQ9NY61 560 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSU72-202ENST00000359060 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 V9GY48 417 aaPredicted RBP12.85□□□□□ -0.35
SSU72-202ENST00000359060 CHD2O14647 1828 aaKnown RBP12.85□□□□□ -0.35
SSU72-202ENST00000359060 KIF23Q02241 960 aaPredicted RBP12.85□□□□□ -0.35
SSU72-202ENST00000359060 CEP135Q66GS9 1140 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 SMIM5Q71RC9 77 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 DHX58Q96C10 678 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 TCHHQ07283 1943 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 PDE4BQ07343 736 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 COL15A1P39059 1388 aa12.85□□□□□ -0.35
SSU72-202ENST00000359060 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 TRIM75PA6NK02 468 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 PPARAQ07869 468 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 ZNF444Q8N0Y2 327 aaPredicted RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 SH2B2O14492 632 aaPredicted RBP12.84□□□□□ -0.35
SSU72-202ENST00000359060 ZNF654Q8IZM8 581 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 PNOCQ13519 176 aa12.84□□□□□ -0.35
SSU72-202ENST00000359060 DPCR1Q3MIW9 517 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms