RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 COL1A1P02452 1464 aaPredicted RBP17.46■□□□□ 0.39
GABPB1-202ENST00000359031 POLD1P28340 1107 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 ZNF827Q17R98 1081 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 ARMT1Q9H993 441 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 LRP2BPQ9P2M1 347 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
GABPB1-202ENST00000359031 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
GABPB1-202ENST00000359031 PDS5AQ29RF7 1337 aaKnown RBP17.45■□□□□ 0.38
GABPB1-202ENST00000359031 GOLGA6L4A6NEF3 574 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 SEMA3EO15041 775 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 DENND2AQ9ULE3 1009 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
GABPB1-202ENST00000359031 GSG1L2A8MUP6 293 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 HS1BP3Q53T59 392 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 TPTE2Q6XPS3 522 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 CELF1Q92879 486 aaKnown RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 FUCA2Q9BTY2 467 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 RRAGDQ9NQL2 400 aaPredicted RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 DDX19AQ9NUU7 478 aaKnown RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 NEDD4P46934 1319 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 CPLX1O14810 134 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 ZBTB22O15209 634 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 FDPSP14324 419 aaKnown RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 LCORLQ8N3X6 602 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 KRT23Q9C075 422 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 ANKRD2Q9GZV1 360 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 NUP62CLQ9H1M0 184 aa17.43■□□□□ 0.38
GABPB1-202ENST00000359031 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
GABPB1-202ENST00000359031 UBR3Q6ZT12 1888 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 UTRNP46939 3433 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 B4E1Z4 1266 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 CDKL5O76039 1030 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 GYG1P46976 350 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 TDO2P48775 406 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
GABPB1-202ENST00000359031 AKNAD1Q5T1N1 836 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 STAG1Q8WVM7 1258 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
GABPB1-202ENST00000359031 SLC4A4Q9Y6R1 1079 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 NID2Q14112 1375 aa17.42■□□□□ 0.38
GABPB1-202ENST00000359031 ESPNB1AK53 854 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 CYP7A1P22680 504 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 ADD1P35611 737 aaKnown RBP17.41■□□□□ 0.38
GABPB1-202ENST00000359031 TPRNQ4KMQ1 711 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 VPS37DQ86XT2 251 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 C8orf76Q96K31 380 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 ORC3Q9UBD5 711 aaPredicted RBP17.41■□□□□ 0.38
GABPB1-202ENST00000359031 LAMB1P07942 1786 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
GABPB1-202ENST00000359031 LIG1P18858 919 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 LIFRP42702 1097 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 METAP2P50579 478 aaKnown RBP eCLIP17.4■□□□□ 0.38
GABPB1-202ENST00000359031 FOSBP53539 338 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
GABPB1-202ENST00000359031 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 SLC16A10Q8TF71 515 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 RNF41Q9H4P4 317 aaPredicted RBP17.4■□□□□ 0.38
GABPB1-202ENST00000359031 LRRC4BQ9NT99 713 aa17.4■□□□□ 0.38
GABPB1-202ENST00000359031 MAGEB6P1A0A0J9YX57 407 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 ADRA2BP18089 450 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 MAP3K11Q16584 847 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 GIMAP6Q6P9H5 292 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 TMED8Q6PL24 325 aaPredicted RBP17.39■□□□□ 0.38
GABPB1-202ENST00000359031 APOA5Q6Q788 366 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 MFSD6Q6ZSS7 791 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 SMIM5Q71RC9 77 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 BICD2Q8TD16 824 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 IGDCC4Q8TDY8 1250 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 PGBD1Q96JS3 809 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.38
GABPB1-202ENST00000359031 LY9Q9HBG7 655 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 RAI14Q9P0K7 980 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 RCOR1Q9UKL0 485 aa17.39■□□□□ 0.38
GABPB1-202ENST00000359031 CCDC192P0DO97 292 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 RFC4P35249 363 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 TMEM67Q5HYA8 995 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 CLSTN2Q9H4D0 955 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 TFCP2L1Q9NZI6 479 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 ABCF2Q9UG63 623 aa17.39■□□□□ 0.37
GABPB1-202ENST00000359031 IQSEC3Q9UPP2 1182 aaPredicted RBP17.39■□□□□ 0.37
GABPB1-202ENST00000359031 DUOX1Q9NRD9 1551 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 ZBTB43O43298 467 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 PRKAB2O43741 272 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 CLCN1P35523 988 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 CTDSPL2Q05D32 466 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 TRAPPC3LQ5T215 181 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
GABPB1-202ENST00000359031 BRAPQ7Z569 592 aa17.38■□□□□ 0.37
GABPB1-202ENST00000359031 MIGA1Q8NAN2 632 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms