RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 IFNKQ9P0W0 207 aa16.4■□□□□ 0.22
SIRPA-202ENST00000358771 ZNF202O95125 648 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 PDE4BQ07343 736 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 V9GY48 417 aaPredicted RBP16.39■□□□□ 0.21
SIRPA-202ENST00000358771 GNAT2P19087 354 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 DHX58Q96C10 678 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 PIK3C2AO00443 1686 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 RESTQ13127 1097 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 TMTC2Q8N394 836 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
SIRPA-202ENST00000358771 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
SIRPA-202ENST00000358771 FBXO3Q9UK99 471 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 CARMIL3Q8ND23 1372 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 USPL1Q5W0Q7 1092 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 CAVIN2O95810 425 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 FAM47AQ5JRC9 791 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 NRBP1Q9UHY1 535 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 MST1RQ04912 1400 aa16.38■□□□□ 0.21
SIRPA-202ENST00000358771 BTBD18B2RXH4 712 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 USP17L12C9JPN9 530 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 USP17L21D6R901 530 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
SIRPA-202ENST00000358771 NDUFA8P51970 172 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 FILIP1LQ4L180 1135 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 SMARCE1Q969G3 411 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
SIRPA-202ENST00000358771 CDCA7Q9BWT1 371 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-202ENST00000358771 CYP2D7A0A087X1C5 515 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 MPHOSPH10O00566 681 aaKnown RBP16.37■□□□□ 0.21
SIRPA-202ENST00000358771 STX17P56962 302 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 UBASH3AP57075 661 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 UBE3CQ15386 1083 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 LCORLQ8N3X6 602 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 MED23Q9ULK4 1368 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 RPS8P62241 208 aaKnown RBP16.37■□□□□ 0.21
SIRPA-202ENST00000358771 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
SIRPA-202ENST00000358771 CCDC194A0A1B0GVG4 234 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 ERFEQ4G0M1 354 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 DACH1Q9UI36 760 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 V9GYY5 206 aaPredicted RBP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 CBFA2T2O43439 604 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 PPFIBP1Q86W92 1011 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 TBC1D10CQ8IV04 446 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 DENND2AQ9ULE3 1009 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 ZNF75DP51815 510 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
SIRPA-202ENST00000358771 ZNF174Q15697 407 aa16.36■□□□□ 0.21
SIRPA-202ENST00000358771 TRIM75PA6NK02 468 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 CLSTN1O94985 981 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 PICALMQ13492 652 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 TMEM87AQ8NBN3 555 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 STAMQ92783 540 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 RIPOR2Q9Y4F9 1068 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 RIMBP2O15034 1052 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 BAG3O95817 575 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 PPARAQ07869 468 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 AKAP12Q02952 1782 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
SIRPA-202ENST00000358771 POLR2DO15514 142 aaKnown RBP16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ADALQ6DHV7 355 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 KRI1Q8N9T8 703 aaKnown RBP16.34■□□□□ 0.21
SIRPA-202ENST00000358771 PLIN2Q99541 437 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ELP1O95163 1332 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 PFKFB1P16118 471 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ZHX3Q9H4I2 956 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 KCNH3Q9ULD8 1083 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 IPO7O95373 1038 aaKnown RBP16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 ATL3Q6DD88 541 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 HEATR3Q7Z4Q2 680 aa16.34■□□□□ 0.21
SIRPA-202ENST00000358771 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.21
SIRPA-202ENST00000358771 MCM7P33993 719 aa16.33■□□□□ 0.21
SIRPA-202ENST00000358771 PTPN21Q16825 1174 aa16.33■□□□□ 0.21
SIRPA-202ENST00000358771 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.21
SIRPA-202ENST00000358771 PYCARDQ9ULZ3 195 aa16.33■□□□□ 0.21
SIRPA-202ENST00000358771 TNKSO95271 1327 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 VWA3AA6NCI4 1184 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
SIRPA-202ENST00000358771 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 KLHL34Q8N239 644 aa16.33■□□□□ 0.2
SIRPA-202ENST00000358771 KIF5BP33176 963 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms