RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 KRT40Q6A162 431 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 DTHD1Q6ZMT9 781 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 HAUS7Q99871 368 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 TBCAO75347 108 aaKnown RBP16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 ZNF202O95125 648 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 UBXN1Q04323 297 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 DRC1Q96MC2 740 aa16.62■□□□□ 0.25
SLC6A20-202ENST00000358525 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 TNNI2P48788 182 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 USP8P40818 1118 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 MMRN2Q9H8L6 949 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 CTAGE15A4D2H0 777 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 CTAGE8P0CG41 777 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 SEPT7Q16181 437 aaKnown RBP16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 CTAGE6Q86UF2 777 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 CTAGE4Q8IX94 777 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
SLC6A20-202ENST00000358525 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 SYCP3Q8IZU3 236 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 SAMM50Q9Y512 469 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 TOM1O60784 492 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 POLR2DO15514 142 aaKnown RBP16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 HIBADHP31937 336 aaKnown RBP16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 HLTFQ14527 1009 aaKnown RBP eCLIP16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 ZHX1Q9UKY1 873 aaPredicted RBP16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 TUBB4AP04350 444 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 HSPD1P10809 573 aaKnown RBP16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 MROH5Q6ZUA9 1318 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
SLC6A20-202ENST00000358525 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 CTAGE9A4FU28 777 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 CUTAO60888 179 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 PLCG2P16885 1265 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 CTSWP56202 376 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 SHTN1A0MZ66 631 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 MAP4K1Q92918 833 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 ARFGAP3Q9NP61 516 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 NR1I2O75469 434 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 FANCCQ00597 558 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 PRPF4BQ13523 1007 aaKnown RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 BAG1Q99933 345 aaPredicted RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 SRRTQ9BXP5 876 aaKnown RBP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 AATFQ9NY61 560 aaKnown RBP eCLIP16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
SLC6A20-202ENST00000358525 GNA11P29992 359 aa16.58■□□□□ 0.25
SLC6A20-202ENST00000358525 CETN1Q12798 172 aa16.58■□□□□ 0.25
SLC6A20-202ENST00000358525 COPRSQ9NQ92 184 aa16.58■□□□□ 0.25
SLC6A20-202ENST00000358525 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.25
SLC6A20-202ENST00000358525 SLAIN2Q9P270 581 aa16.58■□□□□ 0.25
SLC6A20-202ENST00000358525 STXBP4Q6ZWJ1 553 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 SPAG5Q96R06 1193 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 CCDC113Q9H0I3 377 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 E9PCH4 1651 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 LMAN1P49257 510 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 NLRP12P59046 1061 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 IFFO1Q0D2I5 559 aa16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 BCCIPQ9P287 314 aaKnown RBP eCLIP16.58■□□□□ 0.24
SLC6A20-202ENST00000358525 PFKFB2O60825 505 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 ZNF569Q5MCW4 686 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 TRERF1Q96PN7 1200 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 GUCA1BQ9UMX6 200 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 PARP1P09874 1014 aaKnown RBP16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 LETM2Q2VYF4 491 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 ZNF274Q96GC6 653 aaPredicted RBP16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 ADCY9O60503 1353 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 hCG_1642624A0A1W2PR95 340 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 CKAP4Q07065 602 aaKnown RBP16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 USP28Q96RU2 1077 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 CPSF1Q10570 1443 aaKnown RBP16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 ARHGAP31Q2M1Z3 1444 aa16.57■□□□□ 0.24
SLC6A20-202ENST00000358525 MCM6Q14566 821 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 ZNF589Q86UQ0 364 aaPredicted RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 GOLGA1Q92805 767 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 CDCA7Q9BWT1 371 aaPredicted RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 PUF60Q9UHX1 559 aaKnown RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 QRICH2Q9H0J4 1663 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 BICDL2A1A5D9 508 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 AKR1B15C9JRZ8 316 aaPredicted RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 RIOK3O14730 519 aaKnown RBP16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 TTC6Q86TZ1 520 aa16.56■□□□□ 0.24
SLC6A20-202ENST00000358525 TEX11Q8IYF3 940 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms