RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 BNIP3LO60238 219 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 CARD10Q9BWT7 1032 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
CHD3-202ENST00000358181 ERCC6LQ2NKX8 1250 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 ATP2A3Q93084 1043 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.661e-5■■■■□ 19.8
CHD3-202ENST00000358181 ZSCAN32Q9NX65 697 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 RSPH14Q9UHP6 348 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 NOS1P29475 1434 aa10.94□□□□□ -0.66
CHD3-202ENST00000358181 MUM1L1Q5H9M0 696 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 KIF1BPQ96EK5 621 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 UBN1Q9NPG3 1134 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
CHD3-202ENST00000358181 LRRC23Q53EV4 343 aaPredicted RBP10.93□□□□□ -0.66
CHD3-202ENST00000358181 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 ZEB2O60315 1214 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 ZFYP08048 801 aaPredicted RBP10.93□□□□□ -0.66
CHD3-202ENST00000358181 MTRQ99707 1265 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 TTC22Q5TAA0 569 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 ANLNQ9NQW6 1124 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 HAUS2Q9NVX0 235 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 SLC12A2P55011 1212 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
CHD3-202ENST00000358181 ACEP12821 1306 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 TACC1O75410 805 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 WTAPQ15007 396 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 GADL1Q6ZQY3 521 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 TCEANC2Q96MN5 208 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 NR1H4Q96RI1 486 aaPredicted RBP10.93□□□□□ -0.66
CHD3-202ENST00000358181 BACH2Q9BYV9 841 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 SPC25Q9HBM1 224 aa10.93□□□□□ -0.66
CHD3-202ENST00000358181 SCYL1Q96KG9 808 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 POLIQ9UNA4 740 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 PALM3A6NDB9 673 aaPredicted RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 SEL1L2Q5TEA6 688 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 SZRD1Q7Z422 152 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 STIM2Q9P246 746 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 MYLK4Q86YV6 388 aaPredicted RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 PI4KAP1Q8N8J0 262 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 APOL6Q9BWW8 343 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 STMN4Q9H169 189 aaPredicted RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 MICALL1Q8N3F8 863 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 ZC3H12CQ9C0D7 883 aaKnown RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 MYSM1Q5VVJ2 828 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 ZNF830Q96NB3 372 aaPredicted RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 MARCKSP29966 332 aaPredicted RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 CALCOCO2Q13137 446 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 CHPF2Q9P2E5 772 aa10.92□□□□□ -0.66
CHD3-202ENST00000358181 NSFL1CQ9UNZ2 370 aaKnown RBP10.92□□□□□ -0.66
CHD3-202ENST00000358181 NCKAP5LQ9HCH0 1330 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 GNG11P61952 73 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 CCDC121Q6ZUS5 278 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 INTS8Q75QN2 995 aaKnown RBP10.91□□□□□ -0.66
CHD3-202ENST00000358181 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 PTPN23Q9H3S7 1636 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 GSTA1P08263 222 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 GSTA2P09210 222 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 STMN1P16949 149 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 ARHGAP27Q6ZUM4 889 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 PALM2Q8IXS6 379 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 NEDD9Q14511 834 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 USH1GQ495M9 461 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 FAM135AQ9P2D6 1515 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 MX2P20592 715 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 MIGA1Q8NAN2 632 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 ARHGEF2Q92974 986 aaKnown RBP10.91□□□□□ -0.66
CHD3-202ENST00000358181 TTC14Q96N46 770 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 YIPF2Q9BWQ6 316 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 PPP1R12CQ9BZL4 782 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 CETN3O15182 167 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 IGSF3O75054 1194 aa10.91□□□□□ -0.66
CHD3-202ENST00000358181 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
CHD3-202ENST00000358181 TRAPPC10P48553 1259 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 MAP7Q14244 749 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 CPXCR1Q8N123 301 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 DHX58Q96C10 678 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 MAGI1Q96QZ7 1491 aaPredicted RBP10.9□□□□□ -0.66
CHD3-202ENST00000358181 RAB11FIP3O75154 756 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 JADE1Q6IE81 842 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 PDZD8Q8NEN9 1154 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 HELBQ8NG08 1087 aaPredicted RBP10.9□□□□□ -0.66
CHD3-202ENST00000358181 AZI2Q9H6S1 392 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 NIP7Q9Y221 180 aaKnown RBP eCLIP10.9□□□□□ -0.66
CHD3-202ENST00000358181 PLEKHH2Q8IVE3 1493 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
CHD3-202ENST00000358181 C1orf228Q6PIY5 440 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 CPLX4Q7Z7G2 160 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 CCDC24Q8N4L8 307 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 MBIPQ9NS73 344 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 STK32BQ9NY57 414 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 ATICP31939 592 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 IGBP1P78318 339 aa10.9□□□□□ -0.66
CHD3-202ENST00000358181 SCYL2Q6P3W7 929 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms