RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 APOBRQ0VD83 1088 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 GRAPQ13588 217 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 TTLL5Q6EMB2 1281 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 TTC6Q86TZ1 520 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 FUCA2Q9BTY2 467 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
NIPAL3-203ENST00000358028 CELF1Q92879 486 aaKnown RBP16.78■□□□□ 0.28
NIPAL3-203ENST00000358028 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.78■□□□□ 0.28
NIPAL3-203ENST00000358028 GPBP1L1Q9HC44 474 aaPredicted RBP16.78■□□□□ 0.28
NIPAL3-203ENST00000358028 A0A1B0GUL6 1792 aa16.78■□□□□ 0.28
NIPAL3-203ENST00000358028 LTBP1Q14766 1721 aa16.78■□□□□ 0.28
NIPAL3-203ENST00000358028 PDE8BO95263 885 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 RESTQ13127 1097 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 CCDC152Q4G0S7 254 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 ZSCAN25Q6NSZ9 544 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 FAM173BQ6P4H8 233 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 NSUN7Q8NE18 718 aaKnown RBP16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 MYH15Q9Y2K3 1946 aa16.77■□□□□ 0.28
NIPAL3-203ENST00000358028 MROH5Q6ZUA9 1318 aa16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 PRELPP51888 382 aa16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 TTF1Q15361 905 aaPredicted RBP16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 CCDC93Q567U6 631 aa16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 DDX11Q96FC9 970 aa16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 PUS7LQ9H0K6 701 aaKnown RBP16.77■□□□□ 0.27
NIPAL3-203ENST00000358028 H3BQV1 296 aa16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 HMGN5P82970 282 aaKnown RBP16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 IFFO2Q5TF58 517 aa16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 FBXL16Q8N461 479 aa16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
NIPAL3-203ENST00000358028 DUOX1Q9NRD9 1551 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 GPAA1O43292 621 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 UQCRFS1P1P0C7P4 283 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 ARID4AP29374 1257 aaPredicted RBP16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 ADD2P35612 726 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 PUM3Q15397 648 aaKnown RBP16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 SOGA3Q5TF21 947 aa16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 MYO5AQ9Y4I1 1855 aaKnown RBP16.75■□□□□ 0.27
NIPAL3-203ENST00000358028 PTPDC1A2A3K4 754 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 FGAP02671 866 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 CCDC192P0DO97 292 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 FGFR2P21802 821 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 NAA16Q6N069 864 aaPredicted RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 LPIN2Q92539 896 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 ZSCAN16Q9H4T2 348 aaPredicted RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 PIH1D3Q9NQM4 214 aaKnown RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 KIF3AQ9Y496 699 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 BBOX1O75936 387 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 PHKA1P46020 1223 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 HAND2P61296 217 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 CCT2P78371 535 aaKnown RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 C9orf131Q5VYM1 1079 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 LEO1Q8WVC0 666 aaPredicted RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
NIPAL3-203ENST00000358028 DOCK2Q92608 1830 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 KDM4AO75164 1064 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 EVCP57679 992 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 UBE3CQ15386 1083 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 MB21D2Q8IYB1 491 aaPredicted RBP16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 LTBP3Q9NS15 1303 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 SALL1Q9NSC2 1324 aa16.73■□□□□ 0.27
NIPAL3-203ENST00000358028 SLC5A1P13866 664 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 RPS8P62241 208 aaKnown RBP16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 SLC9C2Q5TAH2 1124 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 ZNF213O14771 459 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 KIF3CO14782 793 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 PRC1O43663 620 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 MAP3K11Q16584 847 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 RTKN2Q8IZC4 609 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 HELBQ8NG08 1087 aaPredicted RBP16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 NCOA7Q8NI08 942 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 NUP62CLQ9H1M0 184 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 NCOA5Q9HCD5 579 aaKnown RBP16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 RNF181Q9P0P0 153 aa16.72■□□□□ 0.27
NIPAL3-203ENST00000358028 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 COL4A5P29400 1685 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 IDH1O75874 414 aaKnown RBP16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 ADCY5O95622 1261 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 TPM3P06753 285 aa16.71■□□□□ 0.27
NIPAL3-203ENST00000358028 LIG1P18858 919 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms