RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 CAVIN4Q5BKX8 364 aa20.05■□□□□ 0.8
IFT20-202ENST00000357896 FBXO33Q7Z6M2 555 aa20.05■□□□□ 0.8
IFT20-202ENST00000357896 C9orf78Q9NZ63 289 aaPredicted RBP20.05■□□□□ 0.8
IFT20-202ENST00000357896 ZBTB7BO15156 539 aaPredicted RBP20.04■□□□□ 0.8
IFT20-202ENST00000357896 CHAF1AQ13111 956 aaPredicted RBP20.04■□□□□ 0.8
IFT20-202ENST00000357896 GRIK5Q16478 980 aa20.04■□□□□ 0.8
IFT20-202ENST00000357896 U2AF1L4Q8WU68 220 aaKnown RBP20.04■□□□□ 0.8
IFT20-202ENST00000357896 SUGT1Q9Y2Z0 365 aa20.04■□□□□ 0.8
IFT20-202ENST00000357896 ZSWIM8A7E2V4 1837 aa20.04■□□□□ 0.8
IFT20-202ENST00000357896 A0A0C4DFX4 3053 aa20.04■□□□□ 0.8
IFT20-202ENST00000357896 MAST3O60307 1309 aa20.03■□□□□ 0.8
IFT20-202ENST00000357896 F6X3S4 739 aa20.03■□□□□ 0.8
IFT20-202ENST00000357896 FARP2O94887 1054 aaPredicted RBP20.03■□□□□ 0.8
IFT20-202ENST00000357896 FCGRTP55899 365 aa20.03■□□□□ 0.8
IFT20-202ENST00000357896 APOBEC3HQ6NTF7 200 aaKnown RBP20.03■□□□□ 0.8
IFT20-202ENST00000357896 SLAIN1Q8ND83 568 aa20.03■□□□□ 0.8
IFT20-202ENST00000357896 IQSEC3Q9UPP2 1182 aaPredicted RBP20.03■□□□□ 0.8
IFT20-202ENST00000357896 KCNH4Q9UQ05 1017 aa20.03■□□□□ 0.8
IFT20-202ENST00000357896 RPAP1Q9BWH6 1393 aaPredicted RBP20.03■□□□□ 0.8
IFT20-202ENST00000357896 ADGRA2Q96PE1 1338 aa20.02■□□□□ 0.8
IFT20-202ENST00000357896 VAMP4O75379 141 aa20.02■□□□□ 0.8
IFT20-202ENST00000357896 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
IFT20-202ENST00000357896 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
IFT20-202ENST00000357896 EVI5O60447 810 aa20.01■□□□□ 0.79
IFT20-202ENST00000357896 SGPL1O95470 568 aa20.01■□□□□ 0.79
IFT20-202ENST00000357896 INPP5BP32019 993 aa20.01■□□□□ 0.79
IFT20-202ENST00000357896 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
IFT20-202ENST00000357896 PUS3Q9BZE2 481 aaKnown RBP20.01■□□□□ 0.79
IFT20-202ENST00000357896 CACNA1FO60840 1977 aa20.01■□□□□ 0.79
IFT20-202ENST00000357896 COL6A3P12111 3177 aa20■□□□□ 0.79
IFT20-202ENST00000357896 ALDH1L1O75891 902 aa20■□□□□ 0.79
IFT20-202ENST00000357896 PRKCZQ05513 592 aa20■□□□□ 0.79
IFT20-202ENST00000357896 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
IFT20-202ENST00000357896 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
IFT20-202ENST00000357896 FAM151AQ8WW52 585 aa19.99■□□□□ 0.79
IFT20-202ENST00000357896 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
IFT20-202ENST00000357896 CXCL11O14625 94 aa19.98■□□□□ 0.79
IFT20-202ENST00000357896 BCRP11274 1271 aa19.98■□□□□ 0.79
IFT20-202ENST00000357896 MOGSQ13724 837 aa19.98■□□□□ 0.79
IFT20-202ENST00000357896 UNC93B1Q9H1C4 597 aa19.98■□□□□ 0.79
IFT20-202ENST00000357896 ADCY3O60266 1144 aa19.97■□□□□ 0.79
IFT20-202ENST00000357896 PDE8BO95263 885 aa19.97■□□□□ 0.79
IFT20-202ENST00000357896 TFRCP02786 760 aaKnown RBP19.97■□□□□ 0.79
IFT20-202ENST00000357896 METTL24Q5JXM2 366 aa19.97■□□□□ 0.79
IFT20-202ENST00000357896 NOL9Q5SY16 702 aaKnown RBP19.97■□□□□ 0.79
IFT20-202ENST00000357896 PXYLP1Q8TE99 480 aa19.97■□□□□ 0.79
IFT20-202ENST00000357896 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
IFT20-202ENST00000357896 LAMA3Q16787 3333 aa19.96■□□□□ 0.79
IFT20-202ENST00000357896 MNX1P50219 401 aaPredicted RBP19.96■□□□□ 0.79
IFT20-202ENST00000357896 BCAMP50895 628 aa19.96■□□□□ 0.79
IFT20-202ENST00000357896 FASTKD5Q7L8L6 764 aaKnown RBP19.96■□□□□ 0.79
IFT20-202ENST00000357896 CYP2C8P10632 490 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 GPAT2Q6NUI2 795 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 SLC4A10Q6U841 1118 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 SUCLG2Q96I99 432 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 STAP2Q9UGK3 403 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 GABRQQ9UN88 632 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 KIF16BQ96L93 1317 aa19.95■□□□□ 0.78
IFT20-202ENST00000357896 SOX1O00570 391 aaPredicted RBP19.94■□□□□ 0.78
IFT20-202ENST00000357896 FLT3LGP49771 235 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 EXOSC9Q06265 439 aaKnown RBP19.94■□□□□ 0.78
IFT20-202ENST00000357896 GPR153Q6NV75 609 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 WDR66Q8TBY9 1149 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 KAZALD1Q96I82 304 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 LRCH3Q96II8 777 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 DEFB118Q96PH6 123 aa19.94■□□□□ 0.78
IFT20-202ENST00000357896 INHAP05111 366 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 IFIT1P09914 478 aaKnown RBP19.93■□□□□ 0.78
IFT20-202ENST00000357896 TCP10Q12799 353 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 IRF5Q13568 498 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 LRRC24Q50LG9 513 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 VGLL2Q8N8G2 317 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 SLC45A1Q9Y2W3 748 aa19.93■□□□□ 0.78
IFT20-202ENST00000357896 TNPO2O14787 897 aaKnown RBP19.92■□□□□ 0.78
IFT20-202ENST00000357896 BMP8BP34820 402 aa19.92■□□□□ 0.78
IFT20-202ENST00000357896 ZEB1P37275 1124 aaPredicted RBP19.92■□□□□ 0.78
IFT20-202ENST00000357896 PAK6Q9NQU5 681 aaPredicted RBP19.92■□□□□ 0.78
IFT20-202ENST00000357896 PICK1Q9NRD5 415 aa19.92■□□□□ 0.78
IFT20-202ENST00000357896 A0A0G2JLL6 359 aaPredicted RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 NBPF7P0C2Y1 421 aaPredicted RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 ELNP15502 786 aa19.91■□□□□ 0.78
IFT20-202ENST00000357896 PUM3Q15397 648 aaKnown RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 RABL6Q3YEC7 729 aaPredicted RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 CDC42EP5Q6NZY7 148 aa19.91■□□□□ 0.78
IFT20-202ENST00000357896 NECAB2Q7Z6G3 386 aa19.91■□□□□ 0.78
IFT20-202ENST00000357896 PRRT2Q7Z6L0 340 aaPredicted RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 BICC1Q9H694 974 aaKnown RBP19.91■□□□□ 0.78
IFT20-202ENST00000357896 ZHX2Q9Y6X8 837 aa19.91■□□□□ 0.78
IFT20-202ENST00000357896 UTYO14607 1347 aa19.91■□□□□ 0.78
IFT20-202ENST00000357896 SMCR8Q8TEV9 937 aaPredicted RBP19.9■□□□□ 0.78
IFT20-202ENST00000357896 PAWRQ96IZ0 340 aaKnown RBP19.9■□□□□ 0.78
IFT20-202ENST00000357896 CRISPLD2Q9H0B8 497 aa19.9■□□□□ 0.78
IFT20-202ENST00000357896 DAGLAQ9Y4D2 1042 aa19.9■□□□□ 0.78
IFT20-202ENST00000357896 NFIAQ12857 509 aa19.89■□□□□ 0.77
IFT20-202ENST00000357896 CUL9Q8IWT3 2517 aa19.89■□□□□ 0.77
IFT20-202ENST00000357896 SCYL3Q8IZE3 742 aa19.89■□□□□ 0.77
IFT20-202ENST00000357896 COA7Q96BR5 231 aa19.89■□□□□ 0.77
IFT20-202ENST00000357896 PTPRAP18433 802 aa19.88■□□□□ 0.77
IFT20-202ENST00000357896 GADL1Q6ZQY3 521 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms