RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 SMC1AQ14683 1233 aaKnown RBP12.71□□□□□ -0.37
FN1-204ENST00000356005 NACA2Q9H009 215 aa12.71□□□□□ -0.37
FN1-204ENST00000356005 TTF2Q9UNY4 1162 aaKnown RBP12.71□□□□□ -0.37
FN1-204ENST00000356005 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.37
FN1-204ENST00000356005 TNNT1P13805 278 aa12.71□□□□□ -0.37
FN1-204ENST00000356005 PLCD1P51178 756 aa12.71□□□□□ -0.37
FN1-204ENST00000356005 GCKRQ14397 625 aa12.71□□□□□ -0.37
FN1-204ENST00000356005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.371e-323■□□□□ 9.4
FN1-204ENST00000356005 FAM193AP78312 1265 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 AATFQ9NY61 560 aaKnown RBP eCLIP12.71□□□□□ -0.382e-10■■■■■ 89.9
FN1-204ENST00000356005 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 PSMD1Q99460 953 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 JAG2Q9Y219 1238 aa12.71□□□□□ -0.38
FN1-204ENST00000356005 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
FN1-204ENST00000356005 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 JAKMIP2Q96AA8 810 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 NPC1L1Q9UHC9 1359 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 SP4Q02446 784 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 MCM7P33993 719 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 SPECC1Q5M775 1068 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 SYNMO15061 1565 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 TRPC3Q13507 836 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 P4HA1P13674 534 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
FN1-204ENST00000356005 SV2BQ7L1I2 683 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 ATP7BP35670 1465 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 TRIM37O94972 964 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 ATP10DQ9P241 1426 aa12.7□□□□□ -0.38
FN1-204ENST00000356005 ZEB2O60315 1214 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 NOC2LQ9Y3T9 749 aaKnown RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 AFMP43652 599 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 NLRX1Q86UT6 975 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 IQUBQ8NA54 791 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 HLTFQ14527 1009 aaKnown RBP eCLIP12.69□□□□□ -0.38
FN1-204ENST00000356005 GADL1Q6ZQY3 521 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 XAGE2Q96GT9 111 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 AKR1B10O60218 316 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 DEXIO95424 95 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 OSBPP22059 807 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 LAMC1P11047 1609 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 CALUO43852 315 aaPredicted RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 CCNT1O60563 726 aaKnown RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 TCP10Q12799 353 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 MCF2L2Q86YR7 1114 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
FN1-204ENST00000356005 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 NEK11Q8NG66 645 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 NOX5Q96PH1 765 aa12.69□□□□□ -0.38
FN1-204ENST00000356005 ZSCAN22P10073 491 aaPredicted RBP12.68□□□□□ -0.38
FN1-204ENST00000356005 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 AOX1Q06278 1338 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 SIK1P57059 783 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 TXNDC16Q9P2K2 825 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 VAMP4O75379 141 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
FN1-204ENST00000356005 ODF2LQ9ULJ1 636 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 QRICH2Q9H0J4 1663 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 CNNM4Q6P4Q7 775 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 IWS1Q96ST2 819 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
FN1-204ENST00000356005 LEMD3Q9Y2U8 911 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 TNNI3KQ59H18 835 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 CEP85Q6P2H3 762 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 FPGT-TNNI3KV9GXZ4 949 aa12.68□□□□□ -0.38
FN1-204ENST00000356005 A1BGP04217 495 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 PCP11498 1178 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 UBASH3AP57075 661 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 ANGEL1Q9UNK9 670 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 BIRC2Q13490 618 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 ARHGEF16Q5VV41 709 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 CREB3L3Q68CJ9 461 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 PANK2Q9BZ23 570 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 ATP2A2P16615 1042 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 TSHZ3Q63HK5 1081 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 CCDC169A6NNP5 214 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 TMOD1P28289 359 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 UNC5CLQ8IV45 518 aa12.67□□□□□ -0.38
FN1-204ENST00000356005 MRPS27Q92552 414 aaKnown RBP12.67□□□□□ -0.38
FN1-204ENST00000356005 JADE2Q9NQC1 790 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms