RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 TWISTNBQ3B726 338 aaPredicted RBP14.2□□□□□ -0.14
RTN3-204ENST00000354497 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 LINS1Q8NG48 757 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 LRCH3Q96II8 777 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 TMOD2Q9NZR1 351 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 ARAP2Q8WZ64 1704 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 A0A1B0GUL6 1792 aa14.2□□□□□ -0.14
RTN3-204ENST00000354497 SOX1O00570 391 aaPredicted RBP14.19□□□□□ -0.14
RTN3-204ENST00000354497 EVI5O60447 810 aa14.19□□□□□ -0.14
RTN3-204ENST00000354497 HIBADHP31937 336 aaKnown RBP14.19□□□□□ -0.14
RTN3-204ENST00000354497 FOXO4P98177 505 aa14.19□□□□□ -0.14
RTN3-204ENST00000354497 LMBR1LQ6UX01 489 aa14.19□□□□□ -0.14
RTN3-204ENST00000354497 C17orf99Q6UX52 265 aa14.19□□□□□ -0.14
RTN3-204ENST00000354497 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
RTN3-204ENST00000354497 IQSEC3Q9UPP2 1182 aaPredicted RBP14.19□□□□□ -0.14
RTN3-204ENST00000354497 PDHXO00330 501 aa14.18□□□□□ -0.14
RTN3-204ENST00000354497 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
RTN3-204ENST00000354497 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
RTN3-204ENST00000354497 TDRD7Q8NHU6 1098 aaKnown RBP14.18□□□□□ -0.14
RTN3-204ENST00000354497 U2AF1L4Q8WU68 220 aaKnown RBP14.18□□□□□ -0.14
RTN3-204ENST00000354497 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
RTN3-204ENST00000354497 PRO3102Q9H379 93 aa14.18□□□□□ -0.14
RTN3-204ENST00000354497 CEP290O15078 2479 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 PRKCZQ05513 592 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
RTN3-204ENST00000354497 GRIK5Q16478 980 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 DCAF15Q66K64 600 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 MIGA2Q7L4E1 593 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 ANKRD23Q86SG2 305 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 UNC93B1Q9H1C4 597 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 STAP2Q9UGK3 403 aa14.17□□□□□ -0.14
RTN3-204ENST00000354497 TFRCP02786 760 aaKnown RBP14.16□□□□□ -0.14
RTN3-204ENST00000354497 FCGRTP55899 365 aa14.16□□□□□ -0.14
RTN3-204ENST00000354497 PPATQ06203 517 aa14.16□□□□□ -0.14
RTN3-204ENST00000354497 UBE2Q1Q7Z7E8 422 aa14.16□□□□□ -0.14
RTN3-204ENST00000354497 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
RTN3-204ENST00000354497 FAM84BQ96KN1 310 aaPredicted RBP14.16□□□□□ -0.14
RTN3-204ENST00000354497 ZNF341Q9BYN7 854 aa14.16□□□□□ -0.14
RTN3-204ENST00000354497 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 INPP5BP32019 993 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 UBE4AQ14139 1066 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 PARK7Q99497 189 aaKnown RBP14.15□□□□□ -0.14
RTN3-204ENST00000354497 GABRQQ9UN88 632 aa14.15□□□□□ -0.14
RTN3-204ENST00000354497 F6X3S4 739 aa14.14□□□□□ -0.15
RTN3-204ENST00000354497 ADCY3O60266 1144 aa14.14□□□□□ -0.15
RTN3-204ENST00000354497 SGPL1O95470 568 aa14.14□□□□□ -0.15
RTN3-204ENST00000354497 CYP2C8P10632 490 aa14.14□□□□□ -0.15
RTN3-204ENST00000354497 MNX1P50219 401 aaPredicted RBP14.14□□□□□ -0.15
RTN3-204ENST00000354497 ADGRA2Q96PE1 1338 aa14.13□□□□□ -0.15
RTN3-204ENST00000354497 ELNP15502 786 aa14.13□□□□□ -0.15
RTN3-204ENST00000354497 FAM83AQ86UY5 434 aa14.13□□□□□ -0.15
RTN3-204ENST00000354497 TBC1D22AQ8WUA7 517 aa14.13□□□□□ -0.15
RTN3-204ENST00000354497 DEFB118Q96PH6 123 aa14.13□□□□□ -0.15
RTN3-204ENST00000354497 PUS3Q9BZE2 481 aaKnown RBP14.13□□□□□ -0.15
RTN3-204ENST00000354497 SUPT16HQ9Y5B9 1047 aaKnown RBP14.13□□□□□ -0.15
RTN3-204ENST00000354497 INHAP05111 366 aa14.12□□□□□ -0.15
RTN3-204ENST00000354497 HDLBPQ00341 1268 aaKnown RBP14.12□□□□□ -0.15
RTN3-204ENST00000354497 CAVIN4Q5BKX8 364 aa14.12□□□□□ -0.15
RTN3-204ENST00000354497 C7orf61Q8IZ16 206 aa14.12□□□□□ -0.15
RTN3-204ENST00000354497 DEFB123Q8N688 67 aa14.12□□□□□ -0.15
RTN3-204ENST00000354497 ZDHHC15Q96MV8 337 aa14.12□□□□□ -0.15
RTN3-204ENST00000354497 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
RTN3-204ENST00000354497 GRM8O00222 908 aa14.11□□□□□ -0.15
RTN3-204ENST00000354497 TCP10Q12799 353 aa14.11□□□□□ -0.15
RTN3-204ENST00000354497 BEND3Q5T5X7 828 aa14.11□□□□□ -0.15
RTN3-204ENST00000354497 Q7L0L9 218 aa14.11□□□□□ -0.15
RTN3-204ENST00000354497 PAWRQ96IZ0 340 aaKnown RBP14.11□□□□□ -0.15
RTN3-204ENST00000354497 ZMYND8Q9ULU4 1186 aaPredicted RBP14.11□□□□□ -0.15
RTN3-204ENST00000354497 KCNH4Q9UQ05 1017 aa14.11□□□□□ -0.15
RTN3-204ENST00000354497 MAST3O60307 1309 aa14.1□□□□□ -0.15
RTN3-204ENST00000354497 TNPO2O14787 897 aaKnown RBP14.1□□□□□ -0.15
RTN3-204ENST00000354497 BCRP11274 1271 aa14.1□□□□□ -0.15
RTN3-204ENST00000354497 FLT3LGP49771 235 aa14.1□□□□□ -0.15
RTN3-204ENST00000354497 METTL24Q5JXM2 366 aa14.1□□□□□ -0.15
RTN3-204ENST00000354497 APOBEC3HQ6NTF7 200 aaKnown RBP14.1□□□□□ -0.15
RTN3-204ENST00000354497 GADL1Q6ZQY3 521 aa14.1□□□□□ -0.15
RTN3-204ENST00000354497 RPAP1Q9BWH6 1393 aaPredicted RBP14.1□□□□□ -0.15
RTN3-204ENST00000354497 MROH5Q6ZUA9 1318 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 RANBP2P49792 3224 aaKnown RBP14.09□□□□□ -0.15
RTN3-204ENST00000354497 BCAMP50895 628 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 MOGSQ13724 837 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 FKBP1CQ5VVH2 108 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 FBXO33Q7Z6M2 555 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 FAM151AQ8WW52 585 aa14.09□□□□□ -0.15
RTN3-204ENST00000354497 GPAT2Q6NUI2 795 aa14.08□□□□□ -0.15
RTN3-204ENST00000354497 SLC4A10Q6U841 1118 aa14.08□□□□□ -0.15
RTN3-204ENST00000354497 NECAB2Q7Z6G3 386 aa14.08□□□□□ -0.15
RTN3-204ENST00000354497 DIS3LQ8TF46 1054 aaKnown RBP14.08□□□□□ -0.15
RTN3-204ENST00000354497 SYN1P17600 705 aa14.07□□□□□ -0.16
RTN3-204ENST00000354497 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
RTN3-204ENST00000354497 SMCR8Q8TEV9 937 aaPredicted RBP14.07□□□□□ -0.16
RTN3-204ENST00000354497 SUCLG2Q96I99 432 aa14.07□□□□□ -0.16
RTN3-204ENST00000354497 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
RTN3-204ENST00000354497 LRRC24Q50LG9 513 aa14.07□□□□□ -0.16
RTN3-204ENST00000354497 NOL9Q5SY16 702 aaKnown RBP14.07□□□□□ -0.16
RTN3-204ENST00000354497 HHIPL2Q6UWX4 724 aa14.07□□□□□ -0.16
RTN3-204ENST00000354497 FASTKD5Q7L8L6 764 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms