RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 POTEB2H3BUK9 544 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 CUTAO60888 179 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 SAFBQ15424 915 aaKnown RBP eCLIP20.16■□□□□ 0.82
TCF4-201ENST00000354452 SLC35F6Q8N357 371 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 ZNF274Q96GC6 653 aaPredicted RBP20.16■□□□□ 0.82
TCF4-201ENST00000354452 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
TCF4-201ENST00000354452 BPIFA3Q9BQP9 254 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 MYL10Q9BUA6 226 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 KCND1Q9NSA2 647 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 CDC23Q9UJX2 597 aa20.16■□□□□ 0.82
TCF4-201ENST00000354452 CCT6AP40227 531 aaKnown RBP20.15■□□□□ 0.82
TCF4-201ENST00000354452 MAGEA9P43362 315 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 PPARDQ03181 441 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 USPL1Q5W0Q7 1092 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 A0A0U1RQJ8 604 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 VSNL1P62760 191 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 PACS2Q86VP3 889 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 ATRIPQ8WXE1 791 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 ZNF213O14771 459 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 METAP2P50579 478 aaKnown RBP eCLIP20.15■□□□□ 0.82
TCF4-201ENST00000354452 PDE4BQ07343 736 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 RRP12Q5JTH9 1297 aaKnown RBP20.15■□□□□ 0.82
TCF4-201ENST00000354452 DACH1Q9UI36 760 aa20.15■□□□□ 0.82
TCF4-201ENST00000354452 MLH3Q9UHC1 1453 aa20.14■□□□□ 0.82
TCF4-201ENST00000354452 MROH7-TTC4A0A0A0MT08 1334 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 TTC19Q6DKK2 380 aaPredicted RBP20.14■□□□□ 0.81
TCF4-201ENST00000354452 AFAP1L1Q8TED9 768 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 AMOTL2Q9Y2J4 779 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 SLC39A14Q15043 492 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 TTC39AQ5SRH9 613 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 FCHSD1Q86WN1 690 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 ACRBPQ8NEB7 543 aa20.14■□□□□ 0.81
TCF4-201ENST00000354452 GCKRQ14397 625 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 TSR1Q2NL82 804 aaKnown RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 KRT40Q6A162 431 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 NCAPH2Q6IBW4 605 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 DHX37Q8IY37 1157 aaKnown RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 RIN2Q8WYP3 895 aaPredicted RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 ZNF609O15014 1411 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 ENC1O14682 589 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 KIF23Q02241 960 aaPredicted RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 RSRC2Q7L4I2 434 aaKnown RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
TCF4-201ENST00000354452 TC2NQ8N9U0 490 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 SLC26A6Q9BXS9 759 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 ROBO2Q9HCK4 1378 aa20.13■□□□□ 0.81
TCF4-201ENST00000354452 RNF40O75150 1001 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 KDRP35968 1356 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 COL15A1P39059 1388 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 IGKV5-2P06315 115 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 NOP2P46087 812 aaKnown RBP20.12■□□□□ 0.81
TCF4-201ENST00000354452 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
TCF4-201ENST00000354452 SHC4Q6S5L8 630 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 NCOA7Q8NI08 942 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 SLF1Q9BQI6 1058 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 FRMPD1Q5SYB0 1578 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 TEX33O43247 280 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 CDC27P30260 824 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 IARSP41252 1262 aaKnown RBP20.12■□□□□ 0.81
TCF4-201ENST00000354452 RBL2Q08999 1139 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 BEND6Q5SZJ8 279 aaPredicted RBP20.12■□□□□ 0.81
TCF4-201ENST00000354452 STAMQ92783 540 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 HAUS7Q99871 368 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 SERTAD1Q9UHV2 236 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 USP6P35125 1406 aa20.12■□□□□ 0.81
TCF4-201ENST00000354452 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.815e-7■■■■■ 29.7
TCF4-201ENST00000354452 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
TCF4-201ENST00000354452 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
TCF4-201ENST00000354452 NEURL1BA8MQ27 555 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 N4BP3O15049 544 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 CCT5P48643 541 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 NAPGQ99747 312 aaPredicted RBP20.11■□□□□ 0.81
TCF4-201ENST00000354452 CENPHQ9H3R5 247 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 AKAP2Q9Y2D5 859 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 ABCA9Q8IUA7 1624 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 HOXB7P09629 217 aa20.11■□□□□ 0.81
TCF4-201ENST00000354452 DDX21Q9NR30 783 aaKnown RBP eCLIP20.11■□□□□ 0.81
TCF4-201ENST00000354452 POSTNQ15063 836 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 RNF113AO15541 343 aaKnown RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 CASP14P31944 242 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 EXOSC10Q01780 885 aaKnown RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 PCMTD1Q96MG8 357 aaPredicted RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 RUFY1Q96T51 708 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 HECW2Q9P2P5 1572 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 PIP4K2BP78356 416 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 PTPN12Q05209 780 aaKnown RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
TCF4-201ENST00000354452 METTL16Q86W50 562 aaKnown RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 SMYD4Q8IYR2 804 aaPredicted RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 MYCBPQ99417 103 aaPredicted RBP20.1■□□□□ 0.81
TCF4-201ENST00000354452 VPS16Q9H269 839 aa20.1■□□□□ 0.81
TCF4-201ENST00000354452 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
TCF4-201ENST00000354452 EBAG9O00559 213 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms