RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DNAAF4Q8WXU2 420 aa20.14■□□□□ 0.81
DDX55-202ENST00000354291 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
DDX55-202ENST00000354291 FAM84BQ96KN1 310 aaPredicted RBP20.14■□□□□ 0.81
DDX55-202ENST00000354291 DEFB118Q96PH6 123 aa20.14■□□□□ 0.81
DDX55-202ENST00000354291 IQSEC3Q9UPP2 1182 aaPredicted RBP20.14■□□□□ 0.81
DDX55-202ENST00000354291 ADCY3O60266 1144 aa20.13■□□□□ 0.81
DDX55-202ENST00000354291 FKBP5Q13451 457 aaPredicted RBP20.13■□□□□ 0.81
DDX55-202ENST00000354291 ZNF341Q9BYN7 854 aa20.13■□□□□ 0.81
DDX55-202ENST00000354291 ADGRA2Q96PE1 1338 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 ELNP15502 786 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
DDX55-202ENST00000354291 FLIIQ13045 1269 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 UBE4AQ14139 1066 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 VPS37DQ86XT2 251 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 TEKT1Q969V4 418 aa20.12■□□□□ 0.81
DDX55-202ENST00000354291 PAWRQ96IZ0 340 aaKnown RBP20.12■□□□□ 0.81
DDX55-202ENST00000354291 FRAT2O75474 233 aaPredicted RBP20.11■□□□□ 0.81
DDX55-202ENST00000354291 INHAP05111 366 aa20.11■□□□□ 0.81
DDX55-202ENST00000354291 CYP2C8P10632 490 aa20.11■□□□□ 0.81
DDX55-202ENST00000354291 FAM83AQ86UY5 434 aa20.11■□□□□ 0.81
DDX55-202ENST00000354291 PARK7Q99497 189 aaKnown RBP20.11■□□□□ 0.81
DDX55-202ENST00000354291 STXBP5LQ9Y2K9 1186 aa20.11■□□□□ 0.81
DDX55-202ENST00000354291 FLT3LGP49771 235 aa20.1■□□□□ 0.81
DDX55-202ENST00000354291 HDLBPQ00341 1268 aaKnown RBP20.1■□□□□ 0.81
DDX55-202ENST00000354291 TWISTNBQ3B726 338 aaPredicted RBP20.1■□□□□ 0.81
DDX55-202ENST00000354291 EPHA10Q5JZY3 1008 aa20.1■□□□□ 0.81
DDX55-202ENST00000354291 GPR153Q6NV75 609 aa20.1■□□□□ 0.81
DDX55-202ENST00000354291 GDF15Q99988 308 aa20.1■□□□□ 0.81
DDX55-202ENST00000354291 TAOK2Q9UL54 1235 aa20.1■□□□□ 0.81
DDX55-202ENST00000354291 ZMYND8Q9ULU4 1186 aaPredicted RBP20.1■□□□□ 0.81
DDX55-202ENST00000354291 BCRP11274 1271 aa20.09■□□□□ 0.81
DDX55-202ENST00000354291 MOGSQ13724 837 aa20.09■□□□□ 0.81
DDX55-202ENST00000354291 C7orf61Q8IZ16 206 aa20.09■□□□□ 0.81
DDX55-202ENST00000354291 COL25A1Q9BXS0 654 aaPredicted RBP20.09■□□□□ 0.81
DDX55-202ENST00000354291 KCNH4Q9UQ05 1017 aa20.09■□□□□ 0.81
DDX55-202ENST00000354291 BMP8BP34820 402 aa20.08■□□□□ 0.81
DDX55-202ENST00000354291 APOBEC3HQ6NTF7 200 aaKnown RBP20.08■□□□□ 0.81
DDX55-202ENST00000354291 NECAB2Q7Z6G3 386 aa20.08■□□□□ 0.81
DDX55-202ENST00000354291 ZDHHC15Q96MV8 337 aa20.08■□□□□ 0.81
DDX55-202ENST00000354291 FKBP1CQ5VVH2 108 aa20.07■□□□□ 0.8
DDX55-202ENST00000354291 GPAT2Q6NUI2 795 aa20.07■□□□□ 0.8
DDX55-202ENST00000354291 DIS3LQ8TF46 1054 aaKnown RBP20.07■□□□□ 0.8
DDX55-202ENST00000354291 TBC1D22AQ8WUA7 517 aa20.07■□□□□ 0.8
DDX55-202ENST00000354291 PUS3Q9BZE2 481 aaKnown RBP20.07■□□□□ 0.8
DDX55-202ENST00000354291 MTMR10Q9NXD2 777 aa20.07■□□□□ 0.8
DDX55-202ENST00000354291 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
DDX55-202ENST00000354291 CAPN2P17655 700 aa20.06■□□□□ 0.8
DDX55-202ENST00000354291 BCAMP50895 628 aa20.06■□□□□ 0.8
DDX55-202ENST00000354291 FBXO33Q7Z6M2 555 aa20.06■□□□□ 0.8
DDX55-202ENST00000354291 PXYLP1Q8TE99 480 aa20.06■□□□□ 0.8
DDX55-202ENST00000354291 TNPO2O14787 897 aaKnown RBP20.05■□□□□ 0.8
DDX55-202ENST00000354291 SYN1P17600 705 aa20.05■□□□□ 0.8
DDX55-202ENST00000354291 TCP10Q12799 353 aa20.05■□□□□ 0.8
DDX55-202ENST00000354291 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
DDX55-202ENST00000354291 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
DDX55-202ENST00000354291 F6X3S4 739 aa20.04■□□□□ 0.8
DDX55-202ENST00000354291 CXCL11O14625 94 aa20.04■□□□□ 0.8
DDX55-202ENST00000354291 LRIT3Q3SXY7 679 aa20.04■□□□□ 0.8
DDX55-202ENST00000354291 CAVIN4Q5BKX8 364 aa20.04■□□□□ 0.8
DDX55-202ENST00000354291 CRISPLD2Q9H0B8 497 aa20.04■□□□□ 0.8
DDX55-202ENST00000354291 PAK6Q9NQU5 681 aaPredicted RBP20.04■□□□□ 0.8
DDX55-202ENST00000354291 FAM151AQ8WW52 585 aa20.03■□□□□ 0.8
DDX55-202ENST00000354291 MAGEA10P43363 369 aaPredicted RBP20.02■□□□□ 0.8
DDX55-202ENST00000354291 IRF5Q13568 498 aa20.02■□□□□ 0.8
DDX55-202ENST00000354291 BEND3Q5T5X7 828 aa20.02■□□□□ 0.8
DDX55-202ENST00000354291 GADL1Q6ZQY3 521 aa20.02■□□□□ 0.8
DDX55-202ENST00000354291 FASTKD5Q7L8L6 764 aaKnown RBP20.02■□□□□ 0.8
DDX55-202ENST00000354291 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
DDX55-202ENST00000354291 C9orf78Q9NZ63 289 aaPredicted RBP20.02■□□□□ 0.8
DDX55-202ENST00000354291 ZHX2Q9Y6X8 837 aa20.02■□□□□ 0.8
DDX55-202ENST00000354291 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
DDX55-202ENST00000354291 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDX55-202ENST00000354291 COA7Q96BR5 231 aa20.01■□□□□ 0.79
DDX55-202ENST00000354291 UBE2OQ9C0C9 1292 aaKnown RBP20.01■□□□□ 0.79
DDX55-202ENST00000354291 A0A1B0GUL6 1792 aa20■□□□□ 0.79
DDX55-202ENST00000354291 GRM8O00222 908 aa20■□□□□ 0.79
DDX55-202ENST00000354291 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
DDX55-202ENST00000354291 SMCR8Q8TEV9 937 aaPredicted RBP20■□□□□ 0.79
DDX55-202ENST00000354291 XRN2Q9H0D6 950 aaKnown RBP eCLIP20■□□□□ 0.79
DDX55-202ENST00000354291 VCANP13611 3396 aa20■□□□□ 0.79
DDX55-202ENST00000354291 MAST3O60307 1309 aa20■□□□□ 0.79
DDX55-202ENST00000354291 MROH5Q6ZUA9 1318 aa20■□□□□ 0.79
DDX55-202ENST00000354291 LAMA2P24043 3122 aaKnown RBP19.99■□□□□ 0.79
DDX55-202ENST00000354291 RPAP1Q9BWH6 1393 aaPredicted RBP19.99■□□□□ 0.79
DDX55-202ENST00000354291 NBPF3Q9H094 633 aa19.99■□□□□ 0.79
DDX55-202ENST00000354291 A0A0G2JLL6 359 aaPredicted RBP19.98■□□□□ 0.79
DDX55-202ENST00000354291 NFIAQ12857 509 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 METTL24Q5JXM2 366 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 CDC42EP5Q6NZY7 148 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 PRRT2Q7Z6L0 340 aaPredicted RBP19.98■□□□□ 0.79
DDX55-202ENST00000354291 ANKLE1Q8NAG6 615 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 PICK1Q9NRD5 415 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
DDX55-202ENST00000354291 ANKRD13CQ8N6S4 541 aa19.97■□□□□ 0.79
DDX55-202ENST00000354291 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
DDX55-202ENST00000354291 ZFPM1Q8IX07 1006 aa19.96■□□□□ 0.79
DDX55-202ENST00000354291 C11orf49Q9H6J7 331 aa19.96■□□□□ 0.79
DDX55-202ENST00000354291 MGAMO43451 1857 aa19.96■□□□□ 0.79
DDX55-202ENST00000354291 AK9Q5TCS8 1911 aa19.96■□□□□ 0.79
DDX55-202ENST00000354291 PTPRAP18433 802 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms