RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 STK32BQ9NY57 414 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 BICRAQ9NZM4 1560 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 APBA3O96018 575 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 SDSP20132 328 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-201ENST00000353414 HSPA4P34932 840 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 VPS52Q8N1B4 723 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 DCLK2Q8N568 766 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 SKA2Q8WVK7 121 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-201ENST00000353414 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 STX10O60499 249 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 IGBP1P78318 339 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 USP21Q9UK80 565 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 PTPRCP08575 1304 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 IGSF3O75054 1194 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 ARID4AP29374 1257 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-201ENST00000353414 RTL1A6NKG5 1358 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 ASXL2Q76L83 1435 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 IDI1Q13907 227 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 MYO1AQ9UBC5 1043 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 CCNL1Q9UK58 526 aaPredicted RBP11.22□□□□□ -0.61
COL11A1-201ENST00000353414 FANCAO15360 1455 aa11.22□□□□□ -0.61
COL11A1-201ENST00000353414 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 TXKP42681 527 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 GSDMDP57764 484 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 B4E1Z4 1266 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 TTC22Q5TAA0 569 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 CNBD1Q8NA66 436 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 TMX3Q96JJ7 454 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 APOL6Q9BWW8 343 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 NKTRP30414 1462 aaKnown RBP11.21□□□□□ -0.61
COL11A1-201ENST00000353414 TRAF5O00463 557 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 SPOPO43791 374 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 PRDM1O75626 825 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 MBD4O95243 580 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 SLC4A1P02730 911 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 SAT1P21673 171 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 PPFIA1Q13136 1202 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 PDE1CQ14123 709 aaPredicted RBP11.21□□□□□ -0.61
COL11A1-201ENST00000353414 VPS16Q9H269 839 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 VPS18Q9P253 973 aa11.21□□□□□ -0.61
COL11A1-201ENST00000353414 RIOK3O14730 519 aaKnown RBP11.21□□□□□ -0.62
COL11A1-201ENST00000353414 BEND3Q5T5X7 828 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 DYMQ7RTS9 669 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 SUDS3Q9H7L9 328 aaPredicted RBP11.21□□□□□ -0.62
COL11A1-201ENST00000353414 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 PLB1Q6P1J6 1458 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 MAGI1Q96QZ7 1491 aaPredicted RBP11.21□□□□□ -0.62
COL11A1-201ENST00000353414 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 CCDC170Q8IYT3 715 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 TROQ12816 1431 aaPredicted RBP11.21□□□□□ -0.62
COL11A1-201ENST00000353414 ALDH1L2Q3SY69 923 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 PIK3AP1Q6ZUJ8 805 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 CCDC110Q8TBZ0 833 aa11.21□□□□□ -0.62
COL11A1-201ENST00000353414 GTPBP4Q9BZE4 634 aaKnown RBP11.21□□□□□ -0.62
COL11A1-201ENST00000353414 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 GOLGA6L9A6NEM1 432 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 TACC1O75410 805 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 ZSCAN22P10073 491 aaPredicted RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 SLC8A3P57103 927 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 FAM184BQ9ULE4 1060 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 M0QZ92 97 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 VIMP08670 466 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 INF2Q27J81 1249 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 NSMFQ6X4W1 530 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 RSPH3Q86UC2 560 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CHMP6Q96FZ7 201 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 UBE2HP62256 183 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 PRPF31Q8WWY3 499 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 MYL10Q9BUA6 226 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 DACT1Q9NYF0 836 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CFBP00751 764 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 EPB41P11171 864 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 IL2RBP14784 551 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 ITIH3Q06033 890 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CCDC42Q96M95 316 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CTAGE15A4D2H0 777 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 H0YIN7 160 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CTAGE8P0CG41 777 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 KIF5AQ12840 1032 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CTAGE6Q86UF2 777 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 CTAGE4Q8IX94 777 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 KLHDC4Q8TBB5 520 aa11.2□□□□□ -0.62
COL11A1-201ENST00000353414 PRPF6O94906 941 aaKnown RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
COL11A1-201ENST00000353414 DAPK1P53355 1430 aa11.19□□□□□ -0.62
COL11A1-201ENST00000353414 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
COL11A1-201ENST00000353414 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
COL11A1-201ENST00000353414 SKILP12757 684 aa11.19□□□□□ -0.62
COL11A1-201ENST00000353414 TCIRG1Q13488 830 aa11.19□□□□□ -0.62
COL11A1-201ENST00000353414 SEPT6Q14141 434 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms