RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 ABCC6O95255 1503 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 ZBTB43O43298 467 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 CDC27P30260 824 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 CBX1P83916 185 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 SPECC1Q5M775 1068 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
TRIM4-201ENST00000349062 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 RPS8P62241 208 aaKnown RBP16.2■□□□□ 0.18
TRIM4-201ENST00000349062 TJP1Q07157 1748 aa16.2■□□□□ 0.18
TRIM4-201ENST00000349062 FGFR2P21802 821 aa16.19■□□□□ 0.18
TRIM4-201ENST00000349062 UBE3CQ15386 1083 aa16.19■□□□□ 0.18
TRIM4-201ENST00000349062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRIM4-201ENST00000349062 KCNJ14Q9UNX9 436 aa16.19■□□□□ 0.18
TRIM4-201ENST00000349062 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
TRIM4-201ENST00000349062 ERICH2A1L162 156 aa16.19■□□□□ 0.18
TRIM4-201ENST00000349062 NAA16Q6N069 864 aaPredicted RBP16.19■□□□□ 0.18
TRIM4-201ENST00000349062 PATL2C9JE40 543 aaKnown RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 DHX16O60231 1041 aaKnown RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 TYRO3Q06418 890 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 ARID4AP29374 1257 aaPredicted RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 PRDX5P30044 214 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 TPTE2Q6XPS3 522 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 NHSL1Q5SYE7 1610 aa16.18■□□□□ 0.18
TRIM4-201ENST00000349062 CPLX2Q6PUV4 134 aaKnown RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 ZNF274Q96GC6 653 aaPredicted RBP16.18■□□□□ 0.18
TRIM4-201ENST00000349062 TAF1P21675 1872 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 UTRNP46939 3433 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
TRIM4-201ENST00000349062 IARSP41252 1262 aaKnown RBP16.17■□□□□ 0.18
TRIM4-201ENST00000349062 TRIM29Q14134 588 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
TRIM4-201ENST00000349062 TMEM87AQ8NBN3 555 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
TRIM4-201ENST00000349062 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 TRIM37O94972 964 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 FAM47AQ5JRC9 791 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 TACC3Q9Y6A5 838 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 UBR2Q8IWV8 1755 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 IGSF3O75054 1194 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 APOA5Q6Q788 366 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 ZNF396Q96N95 335 aaPredicted RBP16.17■□□□□ 0.18
TRIM4-201ENST00000349062 GOLPH3LQ9H4A5 285 aa16.17■□□□□ 0.18
TRIM4-201ENST00000349062 DOT1LQ8TEK3 1739 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 JCADQ9P266 1359 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-201ENST00000349062 BARGINQ6ZT62 677 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 TRIM5Q9C035 493 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-201ENST00000349062 WTAPQ15007 396 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 FAM84BQ96KN1 310 aaPredicted RBP16.16■□□□□ 0.18
TRIM4-201ENST00000349062 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
TRIM4-201ENST00000349062 COL14A1Q05707 1796 aaKnown RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 NMT2O60551 498 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 CYP2D6P10635 497 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 GUCY1A2P33402 732 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 HSPA1LP34931 641 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 SEPT12Q8IYM1 358 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 NUP98P52948 1817 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 USP17L21D6R901 530 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 F8W031 263 aaPredicted RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 NFIXQ14938 502 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 SLIT2O94813 1529 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 MYO5AQ9Y4I1 1855 aaKnown RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
TRIM4-201ENST00000349062 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 LLPHQ9BRT6 129 aaKnown RBP16.15■□□□□ 0.18
TRIM4-201ENST00000349062 AFF2P51816 1311 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 HIBADHP31937 336 aaKnown RBP16.14■□□□□ 0.17
TRIM4-201ENST00000349062 DIXDC1Q155Q3 683 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 ALDH8A1Q9H2A2 487 aaPredicted RBP16.14■□□□□ 0.17
TRIM4-201ENST00000349062 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 BECN2A8MW95 431 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
TRIM4-201ENST00000349062 AP5Z1O43299 807 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 ZNF165P49910 485 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 SART3Q15020 963 aaKnown RBP16.14■□□□□ 0.17
TRIM4-201ENST00000349062 VPS72Q15906 364 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 KRT40Q6A162 431 aa16.14■□□□□ 0.17
TRIM4-201ENST00000349062 ILDR1Q86SU0 546 aaPredicted RBP16.14■□□□□ 0.17
TRIM4-201ENST00000349062 PDLIM2Q96JY6 352 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms