RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 RNF40O75150 1001 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 PFKFB1P16118 471 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 ADD1P35611 737 aaKnown RBP17.34■□□□□ 0.37
PTBP1-201ENST00000349038 KSR2Q6VAB6 950 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 ARHGAP23Q9P227 1491 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 UTYO14607 1347 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 PLEKHG2Q9H7P9 1386 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 ABL1P00519 1130 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
PTBP1-201ENST00000349038 KIF5CO60282 957 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 TDO2P48775 406 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 MAP3K9P80192 1104 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 KIRREL3Q8IZU9 778 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 SUCLG2Q96I99 432 aa17.33■□□□□ 0.37
PTBP1-201ENST00000349038 MATR3P43243 847 aaKnown RBP eCLIP17.33■□□□□ 0.36
PTBP1-201ENST00000349038 CCDC91Q7Z6B0 441 aa17.33■□□□□ 0.36
PTBP1-201ENST00000349038 LMO7Q8WWI1 1683 aa17.33■□□□□ 0.36
PTBP1-201ENST00000349038 MRC1P22897 1456 aa17.33■□□□□ 0.36
PTBP1-201ENST00000349038 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 ARHGAP6O43182 974 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 MYL5Q02045 173 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 LRRIQ3A6PVS8 624 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-201ENST00000349038 BTBD11A6QL63 1104 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 ATP2C2O75185 946 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 TAF5LO75529 589 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 NLRP12P59046 1061 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 NOA1Q8NC60 698 aaKnown RBP17.32■□□□□ 0.36
PTBP1-201ENST00000349038 TFR2Q9UP52 801 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 NCAPHQ15003 741 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
PTBP1-201ENST00000349038 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
PTBP1-201ENST00000349038 ZEB2O60315 1214 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 ACRBPQ8NEB7 543 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 CTDNEP1O95476 244 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 BEND6Q5SZJ8 279 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-201ENST00000349038 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-201ENST00000349038 SLC35F6Q8N357 371 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 SLC24A3Q9HC58 644 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 NFE2L3Q9Y4A8 694 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 HEG1Q9ULI3 1381 aa17.31■□□□□ 0.36
PTBP1-201ENST00000349038 GRM8O00222 908 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CBFA2T2O43439 604 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 KRT32Q14532 448 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 ANKZF1Q9H8Y5 726 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 TBX22Q9Y458 520 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 COL15A1P39059 1388 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 MYL6BP14649 208 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 PPP2R5AQ15172 486 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 STOX1Q6ZVD7 989 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 ABTB2Q8N961 1025 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 IP6K1Q92551 441 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
PTBP1-201ENST00000349038 SUFUQ9UMX1 484 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 GUCA1BQ9UMX6 200 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CAPN7Q9Y6W3 813 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 SRGAP2O75044 1071 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
PTBP1-201ENST00000349038 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 MCTP2Q6DN12 878 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 SRGAP1Q7Z6B7 1085 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CEP57Q86XR8 500 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
PTBP1-201ENST00000349038 PRAMEF22A3QJZ6 481 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 CUTAO60888 179 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 MMS22LQ6ZRQ5 1243 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 BCAS4Q8TDM0 211 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 KAT2BQ92831 832 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 CCDC175P0C221 793 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 CORO7P57737 925 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 PDE4BQ07343 736 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 CRACR2AQ9BSW2 395 aa17.29■□□□□ 0.36
PTBP1-201ENST00000349038 LTN1O94822 1766 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 GOLIM4O00461 696 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 CDC27P30260 824 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 DNA2P51530 1060 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-201ENST00000349038 PPFIBP1Q86W92 1011 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 GIMAP7Q8NHV1 300 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 SMARCC2Q8TAQ2 1214 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 YY1AP1Q9H869 796 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 KCND1Q9NSA2 647 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 PCDHA5Q9Y5H7 936 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 RSRC2Q7L4I2 434 aaKnown RBP17.28■□□□□ 0.36
PTBP1-201ENST00000349038 VSTM4Q8IW00 320 aa17.28■□□□□ 0.36
PTBP1-201ENST00000349038 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms