RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 USO1O60763 962 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 SDCCAG8Q86SQ7 713 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 PDCD7Q8N8D1 485 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 ZSCAN22P10073 491 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 CTNNA2P26232 953 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 NOP2P46087 812 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 NAPAP54920 295 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 RRAGBQ5VZM2 374 aa12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 ZGPATQ8N5A5 531 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 BICC1Q9H694 974 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-202ENST00000348513 UGGT2Q9NYU1 1516 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CETN3O15182 167 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 RPSAP08865 295 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CALM1P0DP23 149 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CALM2P0DP24 149 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CALM3P0DP25 149 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 SYKP43405 635 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 ZNF445P59923 1031 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 GNPATO15228 680 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 ZFXP17010 805 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 ZNF165P49910 485 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 ITSN2Q9NZM3 1697 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 STAT6P42226 847 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CETN1Q12798 172 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 MIER3Q7Z3K6 550 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 NYXQ9GZU5 481 aa12.46□□□□□ -0.41
SMARCE1-202ENST00000348513 IQCGQ9H095 443 aaKnown RBP12.46□□□□□ -0.42
SMARCE1-202ENST00000348513 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 ZC3H12CQ9C0D7 883 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 VTI1AQ96AJ9 217 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 NPATQ14207 1427 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 UBE2HP62256 183 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 ZKSCAN3Q9BRR0 538 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 BAIAP2L1Q9UHR4 511 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 A0A1W2PP64 1363 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 ARFGAP2Q8N6H7 521 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 FBXO18Q8NFZ0 1043 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 MORC4Q8TE76 937 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 TTC14Q96N46 770 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 TRIM7Q9C029 511 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 GOLGA6AQ9NYA3 693 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 SAMD15Q9P1V8 674 aa12.45□□□□□ -0.42
SMARCE1-202ENST00000348513 LMTK3Q96Q04 1460 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 ATP8B1O43520 1251 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 DNAJC8O75937 253 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 NBPF7P0C2Y1 421 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 RFC1P35251 1148 aaPredicted RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 PPP2R3AQ06190 1150 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 TTC16Q8NEE8 873 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 SMARCC2Q8TAQ2 1214 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 LINS1Q8NG48 757 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 VAMP4O75379 141 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 DIXDC1Q155Q3 683 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 STXBP4Q6ZWJ1 553 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 FAM89AQ96GI7 184 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 N4BP3O15049 544 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 RWDD2BP57060 319 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 USH1CQ9Y6N9 552 aa12.44□□□□□ -0.42
SMARCE1-202ENST00000348513 PAFAH1B1P43034 410 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 ZSCAN16Q9H4T2 348 aaPredicted RBP12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 MAP3K19Q56UN5 1328 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 STIM2Q9P246 746 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 ZBTB21Q9ULJ3 1066 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 TMED1Q13445 227 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 TRIM68Q6AZZ1 485 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 G2E3Q7L622 706 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
SMARCE1-202ENST00000348513 PCDH11XQ9BZA7 1347 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms