RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 HECW2Q9P2P5 1572 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 LRRC7Q96NW7 1537 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 CUTAO60888 179 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 DEXIO95424 95 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 KIF2CQ99661 725 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 RASAL2Q9UJF2 1139 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 NSFL1CQ9UNZ2 370 aaKnown RBP5.4□□□□□ -1.54
CSMD3-203ENST00000343508 ITSN1Q15811 1721 aa5.4□□□□□ -1.54
CSMD3-203ENST00000343508 TNNC1P63316 161 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 MKNK2Q9HBH9 465 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 SEPT11Q9NVA2 429 aaKnown RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 SAR1BQ9Y6B6 198 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 CYP2E1P05181 493 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 ZSCAN20P17040 1043 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 ESR2Q92731 530 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 DRC1Q96MC2 740 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 AKR1B10O60218 316 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 G2E3Q7L622 706 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 TTC6Q86TZ1 520 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 USHBP1Q8N6Y0 703 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 TRIM58Q8NG06 486 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 TEX13AQ9BXU3 409 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 RNF216Q9NWF9 866 aaPredicted RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 PALD1Q9ULE6 856 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 NOP2P46087 812 aaKnown RBP5.4□□□□□ -1.55
CSMD3-203ENST00000343508 WHAMMP3Q1A5X7 153 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 TSKSQ9UJT2 592 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 IQSEC2Q5JU85 1478 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 GOLGA8KD6RF30 607 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 CALML3P27482 149 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 DTHD1Q6ZMT9 781 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 DHX58Q96C10 678 aa5.4□□□□□ -1.55
CSMD3-203ENST00000343508 IKQ13123 557 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 C8orf74Q6P047 294 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 SCLT1Q96NL6 688 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 RRP15Q9Y3B9 282 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 RANBP6O60518 1105 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 NDUFA8P51970 172 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ATP11AP98196 1134 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 SRGAP1Q7Z6B7 1085 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 KBTBD3Q8NAB2 608 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 TFCP2Q12800 502 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 IFNL2Q8IZJ0 200 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 USP44Q9H0E7 712 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ANGEL1Q9UNK9 670 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 RTL9Q8NET4 1388 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 WWC3Q9ULE0 1092 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 NLRP1Q9C000 1473 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CLUL1Q15846 466 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 SMARCC2Q8TAQ2 1214 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 SAMD15Q9P1V8 674 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 PFKFB2O60825 505 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 MTX1Q13505 466 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CAPZA3Q96KX2 299 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CAPS2Q9BXY5 557 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 RAD51AP2Q09MP3 1159 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CWF19L2Q2TBE0 894 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 TNNI3KQ59H18 835 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 TOM1L2Q6ZVM7 507 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 SIRT2Q8IXJ6 389 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CCDC26Q8TAB7 109 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 FPGT-TNNI3KV9GXZ4 949 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 YEATS2Q9ULM3 1422 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ANKRD62A6NC57 917 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 DNA2P51530 1060 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CETN1Q12798 172 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 PAK1Q13153 545 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CFAP221Q4G0U5 840 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 NEK11Q8NG66 645 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CPSF2Q9P2I0 782 aaKnown RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 UGGT1Q9NYU2 1555 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 DDIT3P35638 169 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ATP6V1AP38606 617 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 C6orf163Q5TEZ5 329 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CROCCP2Q86T23 111 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ANKRD7Q92527 254 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 AMOTL2Q9Y2J4 779 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
CSMD3-203ENST00000343508 PPP6R2O75170 966 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 FBXO38Q6PIJ6 1188 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 FBXO18Q8NFZ0 1043 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 IFT81Q8WYA0 676 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 MAP4K1Q92918 833 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 IFT74Q96LB3 600 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 EYA1Q99502 592 aa5.39□□□□□ -1.55
CSMD3-203ENST00000343508 ATP5DP30049 168 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ADKP55263 362 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 KAT14Q9H8E8 782 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 POLR3EQ9NVU0 708 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 POTEJP0CG39 1038 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 CCT6AP40227 531 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 PNOCQ13519 176 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 SLC9C2Q5TAH2 1124 aa5.38□□□□□ -1.55
CSMD3-203ENST00000343508 NAP1L3Q99457 506 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 UTP11Q9Y3A2 253 aaKnown RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ZNF444Q8N0Y2 327 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-203ENST00000343508 ZNF652Q9Y2D9 606 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms