RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 VPS36Q86VN1 386 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
VCAN-202ENST00000342785 CYLC1P35663 651 aaPredicted RBP8.18□□□□□ -1.1
VCAN-202ENST00000342785 NAPAP54920 295 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 MTX1Q13505 466 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 CALCOCO1Q9P1Z2 691 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 ZDHHC9Q9Y397 364 aa8.18□□□□□ -1.1
VCAN-202ENST00000342785 POLR2DO15514 142 aaKnown RBP8.17□□□□□ -1.1
VCAN-202ENST00000342785 KIAA0754O94854 1291 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 MATR3P43243 847 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-202ENST00000342785 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
VCAN-202ENST00000342785 TAF3Q5VWG9 929 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 XPO4Q9C0E2 1151 aaKnown RBP8.17□□□□□ -1.1
VCAN-202ENST00000342785 KCNJ14Q9UNX9 436 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 ERBB3P21860 1342 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 GSTO1P78417 241 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 PCDHA7Q9UN72 937 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 MYO1BO43795 1136 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 SCRN1Q12765 414 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 MLKLQ8NB16 471 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 EHBP1Q8NDI1 1231 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 LMAN1P49257 510 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 CTDSPL2Q05D32 466 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 PDE6AP16499 860 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 NLRP12P59046 1061 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 U2AF2P26368 475 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-202ENST00000342785 ZMYM1Q5SVZ6 1142 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 AKNAD1Q5T1N1 836 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 SPATA5Q8NB90 893 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 ALS2CR12Q96Q35 445 aa8.17□□□□□ -1.1
VCAN-202ENST00000342785 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-202ENST00000342785 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
VCAN-202ENST00000342785 PFKFB1P16118 471 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 PLIN2Q99541 437 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 GPR108Q9NPR9 543 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 PCCAP05165 728 aaPredicted RBP8.16□□□□□ -1.1
VCAN-202ENST00000342785 DTHD1Q6ZMT9 781 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 CLEC17AQ6ZS10 378 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 NSUN7Q8NE18 718 aaKnown RBP8.16□□□□□ -1.1
VCAN-202ENST00000342785 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 BCL2L12Q9HB09 334 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 ZNF569Q5MCW4 686 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 CNGA4Q8IV77 575 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 IGSF22Q8N9C0 903 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 C6orf50Q9HD87 102 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 FBXO3Q9UK99 471 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 DENND2AQ9ULE3 1009 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 PYCARDQ9ULZ3 195 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 GUCA1BQ9UMX6 200 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 MRVI1Q9Y6F6 885 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 hCG_1642624A0A1W2PR95 340 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 A2ML1A8K2U0 1454 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 AKR1B15C9JRZ8 316 aaPredicted RBP8.16□□□□□ -1.1
VCAN-202ENST00000342785 IGKV5-2P06315 115 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 CCDC42Q96M95 316 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 MMRN2Q9H8L6 949 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 IMPACTQ9P2X3 320 aa8.16□□□□□ -1.1
VCAN-202ENST00000342785 ZCCHC11Q5TAX3 1644 aaKnown RBP8.16□□□□□ -1.1
VCAN-202ENST00000342785 NLRP1Q9C000 1473 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 EVCP57679 992 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 EPHA10Q5JZY3 1008 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 LRRC27Q9C0I9 530 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 OGFRQ9NZT2 677 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 RNF17Q9BXT8 1623 aaKnown RBP8.15□□□□□ -1.1
VCAN-202ENST00000342785 CTAGE9A4FU28 777 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 ARHGAP6O43182 974 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 HLA-DOAP06340 250 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 UBXN1Q04323 297 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 DRC1Q96MC2 740 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 ZNF219Q9P2Y4 722 aaPredicted RBP8.15□□□□□ -1.1
VCAN-202ENST00000342785 PUF60Q9UHX1 559 aaKnown RBP8.15□□□□□ -1.1
VCAN-202ENST00000342785 RCOR1Q9UKL0 485 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 MADDQ8WXG6 1647 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 ADCY9O60503 1353 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 CMA1P23946 247 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.1
VCAN-202ENST00000342785 GOLGA1Q92805 767 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 MAST3O60307 1309 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 ADORA1P30542 326 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
VCAN-202ENST00000342785 HLTFQ14527 1009 aaKnown RBP eCLIP8.15□□□□□ -1.1
VCAN-202ENST00000342785 STAMQ92783 540 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 FTOQ9C0B1 505 aaKnown RBP eCLIP8.15□□□□□ -1.1
VCAN-202ENST00000342785 SLAIN2Q9P270 581 aa8.15□□□□□ -1.1
VCAN-202ENST00000342785 BTBD18B2RXH4 712 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 KRT86O43790 486 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 LDHBP07195 334 aaKnown RBP8.15□□□□□ -1.11
VCAN-202ENST00000342785 PPP2R5BQ15173 497 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 PIK3AP1Q6ZUJ8 805 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 CEP112Q8N8E3 955 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 RBM28Q9NW13 759 aaKnown RBP8.15□□□□□ -1.11
VCAN-202ENST00000342785 MAPK8IP1Q9UQF2 711 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 F8W031 263 aaPredicted RBP8.15□□□□□ -1.11
VCAN-202ENST00000342785 NOP2P46087 812 aaKnown RBP8.15□□□□□ -1.11
VCAN-202ENST00000342785 TNNI2P48788 182 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 KIF5AQ12840 1032 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 KRT79Q5XKE5 535 aa8.15□□□□□ -1.11
VCAN-202ENST00000342785 TRMT44Q8IYL2 757 aaKnown RBP8.15□□□□□ -1.11
VCAN-202ENST00000342785 VPS16Q9H269 839 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms