RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 COPS6Q7L5N1 327 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 PPP1R42Q7Z4L9 355 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 TICAM2Q86XR7 235 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 SYTL4Q96C24 671 aaPredicted RBP4.41□□□□□ -1.7
CCDC66-202ENST00000341455 BEGAINQ9BUH8 593 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 PDS5AQ29RF7 1337 aaKnown RBP4.41□□□□□ -1.7
CCDC66-202ENST00000341455 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.41□□□□□ -1.7
CCDC66-202ENST00000341455 MAP3K7O43318 606 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 RFC4P35249 363 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 FOXO4P98177 505 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 HLFQ16534 295 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 MSL1Q68DK7 614 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 G2E3Q7L622 706 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 CNTROBQ8N137 903 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 SUPT20HQ8NEM7 779 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 NKX2-3Q8TAU0 364 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 CHMP4BQ9H444 224 aaKnown RBP4.41□□□□□ -1.7
CCDC66-202ENST00000341455 HDAC5Q9UQL6 1122 aa4.41□□□□□ -1.7
CCDC66-202ENST00000341455 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.7
CCDC66-202ENST00000341455 CIAO1O76071 339 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 DGKZQ13574 1117 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 BANK1Q8NDB2 785 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 DPF2Q92785 391 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 KAZALD1Q96I82 304 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 KCNH6Q9H252 994 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 PHAXQ9H814 394 aaKnown RBP4.4□□□□□ -1.7
CCDC66-202ENST00000341455 STXBP5LQ9Y2K9 1186 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 FRMPD3Q5JV73 1810 aa4.4□□□□□ -1.7
CCDC66-202ENST00000341455 TMEM265A0A087WTH1 108 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 ALDH1A1P00352 501 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 SRGNP10124 158 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 TRIM27P14373 513 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 RASSF7Q02833 373 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 SUSD4Q5VX71 490 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 ZKSCAN2Q63HK3 967 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 TMED8Q6PL24 325 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 ANKRD44Q8N8A2 993 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 UTP14AQ9BVJ6 771 aaKnown RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 CWC25Q9NXE8 425 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 RCAN3Q9UKA8 241 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 NOP58Q9Y2X3 529 aaKnown RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 ALPK3Q96L96 1907 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 MGAMO43451 1857 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 MYH7P12883 1935 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 SH3TC1Q8TE82 1336 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 ZBTB7BO15156 539 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 SERPINB2P05120 415 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 RFC5P40937 340 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 KCNMA1Q12791 1236 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 CST9Q5W186 159 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 GPR101Q96P66 508 aaPredicted RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 SRP68Q9UHB9 627 aaKnown RBP4.4□□□□□ -1.71
CCDC66-202ENST00000341455 MAP3K2Q9Y2U5 619 aa4.4□□□□□ -1.71
CCDC66-202ENST00000341455 COL11A1P12107 1806 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 PDE8AO60658 829 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 SSTR3P32745 418 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 RRP1P56182 461 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 MAP3K11Q16584 847 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 C2CD5Q86YS7 1000 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 TRIM47Q96LD4 638 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 USP44Q9H0E7 712 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 GPR108Q9NPR9 543 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF236Q9UL36 1845 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 CDK5RAP2Q96SN8 1893 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 PI4KAP2A4QPH2 592 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 GRM8O00222 908 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 AXIN1O15169 862 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 CD2BP2O95400 341 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 RFX1P22670 979 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 CLCN1P35523 988 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 INHBEP58166 350 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 FKBP1AP62942 108 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 ST5P78524 1137 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 PTGDRQ13258 359 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 MVPQ14764 893 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 TPTE2Q6XPS3 522 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 PI4KAP1Q8N8J0 262 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 MTMR14Q8NCE2 650 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF526Q8TF50 670 aaPredicted RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 SETDB2Q96T68 719 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 GPCPD1Q9NPB8 672 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 ZBTB40Q9NUA8 1239 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 MKRN1Q9UHC7 482 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 NOB1Q9ULX3 412 aaKnown RBP4.39□□□□□ -1.71
CCDC66-202ENST00000341455 MED23Q9ULK4 1368 aa4.39□□□□□ -1.71
CCDC66-202ENST00000341455 LAMA4Q16363 1823 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF541Q9H0D2 1346 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 RBM47A0AV96 593 aaKnown RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 CCDC85CA6NKD9 419 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 CANXP27824 592 aaKnown RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 ALDH1B1P30837 517 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 CTSWP56202 376 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 MDM2Q00987 491 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SWT1Q5T5J6 900 aaKnown RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 NUDT18Q6ZVK8 323 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 VGLL2Q8N8G2 317 aa4.38□□□□□ -1.71
CCDC66-202ENST00000341455 ZNF512BQ96KM6 892 aaPredicted RBP4.38□□□□□ -1.71
CCDC66-202ENST00000341455 SRCIN1Q9C0H9 1055 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms