RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KCNF1Q9H3M0 494 aa23.44■■□□□ 1.34
SPG7-202ENST00000341316 METAP2P50579 478 aaKnown RBP eCLIP23.44■■□□□ 1.34
SPG7-202ENST00000341316 ERFEQ4G0M1 354 aa23.44■■□□□ 1.34
SPG7-202ENST00000341316 SPC24Q8NBT2 197 aa23.44■■□□□ 1.34
SPG7-202ENST00000341316 NAPBQ9H115 298 aa23.44■■□□□ 1.34
SPG7-202ENST00000341316 LY9Q9HBG7 655 aa23.44■■□□□ 1.34
SPG7-202ENST00000341316 IQSEC3Q9UPP2 1182 aaPredicted RBP23.44■■□□□ 1.34
SPG7-202ENST00000341316 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 CCDC144CPQ8IYA2 1237 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 FSIP1Q8NA03 581 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 LINC00301Q8NCQ3 95 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 SMARCC1Q92922 1105 aaPredicted RBP23.43■■□□□ 1.34
SPG7-202ENST00000341316 ARID3AQ99856 593 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.43■■□□□ 1.34
SPG7-202ENST00000341316 FAM98CQ17RN3 349 aaKnown RBP23.43■■□□□ 1.34
SPG7-202ENST00000341316 MYL10Q9BUA6 226 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 ZSWIM5Q9P217 1185 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 LAMB2P55268 1798 aa23.43■■□□□ 1.34
SPG7-202ENST00000341316 ZNF165P49910 485 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 FAM160A1Q05DH4 1040 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 CCDC73Q6ZRK6 1079 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 MICU3Q86XE3 530 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 TMEM87BQ96K49 555 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 PYCARDQ9ULZ3 195 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 COL5A3P25940 1745 aaPredicted RBP23.42■■□□□ 1.34
SPG7-202ENST00000341316 KIF23Q02241 960 aaPredicted RBP23.42■■□□□ 1.34
SPG7-202ENST00000341316 MYSM1Q5VVJ2 828 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 MIGA1Q8NAN2 632 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 TSC1Q92574 1164 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 PHKBQ93100 1093 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 FAM217BQ9NTX9 383 aaPredicted RBP23.42■■□□□ 1.34
SPG7-202ENST00000341316 ZNF652Q9Y2D9 606 aa23.42■■□□□ 1.34
SPG7-202ENST00000341316 A0A087WWV3 80 aa23.41■■□□□ 1.34
SPG7-202ENST00000341316 TMEM67Q5HYA8 995 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 TDRD7Q8NHU6 1098 aaKnown RBP23.4■■□□□ 1.34
SPG7-202ENST00000341316 KIAA1524Q8TCG1 905 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 NTRK3Q16288 839 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 CLEC4GQ6UXB4 293 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 C11orf57Q6ZUT1 292 aaPredicted RBP23.4■■□□□ 1.34
SPG7-202ENST00000341316 ADGRA1Q86SQ6 560 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 ALG1Q9BT22 464 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 POLR3EQ9NVU0 708 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 SLC4A4Q9Y6R1 1079 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 BCORQ6W2J9 1755 aa23.4■■□□□ 1.34
SPG7-202ENST00000341316 UBE2Q2LH0YL09 131 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 ZBTB43O43298 467 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 GYG1P46976 350 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 AKNAD1Q5T1N1 836 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 ADALQ6DHV7 355 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 NFXL1Q6ZNB6 911 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 BRAPQ7Z569 592 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 SGMS1Q86VZ5 419 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 FMR1NBQ8N0W7 255 aaPredicted RBP23.39■■□□□ 1.34
SPG7-202ENST00000341316 ERCC4Q92889 916 aaPredicted RBP23.39■■□□□ 1.34
SPG7-202ENST00000341316 LRP2BPQ9P2M1 347 aa23.39■■□□□ 1.34
SPG7-202ENST00000341316 PNPLA7Q6ZV29 1317 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 A0A1B0GVL5 298 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 CTAGE5O15320 804 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 RANBP6O60518 1105 aaKnown RBP23.39■■□□□ 1.33
SPG7-202ENST00000341316 KINO60870 393 aaKnown RBP23.39■■□□□ 1.33
SPG7-202ENST00000341316 TPM3P06753 285 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 STK38Q15208 465 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 MRPS27Q92552 414 aaKnown RBP23.39■■□□□ 1.33
SPG7-202ENST00000341316 CDC5LQ99459 802 aaKnown RBP23.39■■□□□ 1.33
SPG7-202ENST00000341316 TAOK2Q9UL54 1235 aa23.39■■□□□ 1.33
SPG7-202ENST00000341316 GTF2F1P35269 517 aaKnown RBP eCLIP23.38■■□□□ 1.332e-6■■□□□ 13.3
SPG7-202ENST00000341316 BICDL1Q6ZP65 573 aa23.38■■□□□ 1.33
SPG7-202ENST00000341316 ZNF804BA4D1E1 1349 aa23.38■■□□□ 1.33
SPG7-202ENST00000341316 GOLGA6L6A8MZA4 724 aa23.38■■□□□ 1.33
SPG7-202ENST00000341316 NDUFA8P51970 172 aa23.38■■□□□ 1.33
SPG7-202ENST00000341316 STK11IPQ8N1F8 1099 aa23.38■■□□□ 1.33
SPG7-202ENST00000341316 A0A1W2PQ27 194 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 A0A1W2PQ64 194 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 A0A1W2PQD8 194 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 IFIT3O14879 490 aaKnown RBP23.37■■□□□ 1.33
SPG7-202ENST00000341316 YEATS4O95619 227 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 TDO2P48775 406 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 IQCB1Q15051 598 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 BCL2L12Q9HB09 334 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 COL1A1P02452 1464 aaPredicted RBP23.37■■□□□ 1.33
SPG7-202ENST00000341316 TAF1P21675 1872 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 TIAM2Q8IVF5 1701 aa23.37■■□□□ 1.33
SPG7-202ENST00000341316 GOLGA8AA7E2F4 631 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 SPTLC2O15270 562 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 LIFRP42702 1097 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 SF3B3Q15393 1217 aaKnown RBP23.36■■□□□ 1.33
SPG7-202ENST00000341316 KRT40Q6A162 431 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 ANKRD18AQ8IVF6 992 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 PKNOX2Q96KN3 472 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 ZKSCAN3Q9BRR0 538 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 SF3A1Q15459 793 aaKnown RBP23.36■■□□□ 1.33
SPG7-202ENST00000341316 RRP12Q5JTH9 1297 aaKnown RBP23.36■■□□□ 1.33
SPG7-202ENST00000341316 TBC1D9BQ66K14 1250 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 MFSD6Q6ZSS7 791 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 KCNG4Q8TDN1 519 aa23.36■■□□□ 1.33
SPG7-202ENST00000341316 SMIM22K7EJ46 135 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 CDKL5O76039 1030 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 GNAT2P19087 354 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 CYP7A1P22680 504 aa23.35■■□□□ 1.33
SPG7-202ENST00000341316 ANO1Q5XXA6 986 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms