RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 APPBP2Q92624 585 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 DPF2Q92785 391 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 PODXL2Q9NZ53 605 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 ZMYM6O95789 1325 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 MAP3K15Q6ZN16 1313 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 LRRC24Q50LG9 513 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 RESP18Q5W5W9 173 aa23.83■■□□□ 1.41
CLPB-202ENST00000340729 RALYLQ86SE5 291 aaKnown RBP23.83■■□□□ 1.41
CLPB-202ENST00000340729 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.83■■□□□ 1.41
CLPB-202ENST00000340729 CDKL5O76039 1030 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 TOP1P11387 765 aaKnown RBP23.82■■□□□ 1.4
CLPB-202ENST00000340729 CFAP100Q494V2 611 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 SHC4Q6S5L8 630 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 SYTL4Q96C24 671 aaPredicted RBP23.82■■□□□ 1.4
CLPB-202ENST00000340729 SOS2Q07890 1332 aaPredicted RBP23.82■■□□□ 1.4
CLPB-202ENST00000340729 NHSL1Q5SYE7 1610 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 FANCGO15287 622 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 OLFM4Q6UX06 510 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 CCDC191Q8NCU4 936 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 SLAIN2Q9P270 581 aa23.82■■□□□ 1.4
CLPB-202ENST00000340729 VWA3AA6NCI4 1184 aa23.81■■□□□ 1.4
CLPB-202ENST00000340729 TBX2Q13207 712 aaPredicted RBP23.81■■□□□ 1.4
CLPB-202ENST00000340729 MAP3K14Q99558 947 aa23.81■■□□□ 1.4
CLPB-202ENST00000340729 UTP14AQ9BVJ6 771 aaKnown RBP23.81■■□□□ 1.4
CLPB-202ENST00000340729 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.81■■□□□ 1.4
CLPB-202ENST00000340729 MYH7P12883 1935 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 CUTAO60888 179 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 URI1O94763 535 aaPredicted RBP23.8■■□□□ 1.4
CLPB-202ENST00000340729 HAND2P61296 217 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 VPS37DQ86XT2 251 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 CEP126Q9P2H0 1117 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 AKAP2Q9Y2D5 859 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 PPP2R2CQ9Y2T4 447 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 MARCKSP29966 332 aaPredicted RBP23.8■■□□□ 1.4
CLPB-202ENST00000340729 TEX35Q5T0J7 233 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 GJB4Q9NTQ9 266 aa23.8■■□□□ 1.4
CLPB-202ENST00000340729 ZNF213O14771 459 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 MAP3K9P80192 1104 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 WASHC4Q2M389 1173 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 GPR161Q8N6U8 529 aaKnown RBP23.79■■□□□ 1.4
CLPB-202ENST00000340729 ALG1Q9BT22 464 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 CARD6Q9BX69 1037 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 NBPF26B4DH59 902 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 CYP27B1O15528 508 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 STX10O60499 249 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 GORABQ5T7V8 394 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 NBPF10Q6P3W6 841 aaKnown RBP23.79■■□□□ 1.4
CLPB-202ENST00000340729 NBPF15Q8N660 670 aa23.79■■□□□ 1.4
CLPB-202ENST00000340729 ANGEL1Q9UNK9 670 aaKnown RBP23.79■■□□□ 1.4
CLPB-202ENST00000340729 FKBP4Q02790 459 aaKnown RBP eCLIP23.78■■□□□ 1.4
CLPB-202ENST00000340729 PNOCQ13519 176 aa23.78■■□□□ 1.4
CLPB-202ENST00000340729 TTC39AQ5SRH9 613 aa23.78■■□□□ 1.4
CLPB-202ENST00000340729 CCDC102BQ68D86 513 aa23.78■■□□□ 1.4
CLPB-202ENST00000340729 KRT40Q6A162 431 aa23.78■■□□□ 1.4
CLPB-202ENST00000340729 KRBA2Q6ZNG9 492 aa23.78■■□□□ 1.4
CLPB-202ENST00000340729 METTL16Q86W50 562 aaKnown RBP23.78■■□□□ 1.4
CLPB-202ENST00000340729 INTS13Q9NVM9 706 aa23.77■■□□□ 1.4
CLPB-202ENST00000340729 FANCLQ9NW38 375 aa23.77■■□□□ 1.4
CLPB-202ENST00000340729 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
CLPB-202ENST00000340729 ECM29Q5VYK3 1845 aa23.77■■□□□ 1.4
CLPB-202ENST00000340729 COL5A2P05997 1499 aaPredicted RBP23.77■■□□□ 1.4
CLPB-202ENST00000340729 ISM2Q6H9L7 571 aa23.77■■□□□ 1.4
CLPB-202ENST00000340729 CPLX2Q6PUV4 134 aaKnown RBP23.77■■□□□ 1.4
CLPB-202ENST00000340729 ZNF594Q96JF6 807 aaPredicted RBP23.77■■□□□ 1.4
CLPB-202ENST00000340729 ATRNO75882 1429 aa23.76■■□□□ 1.39
CLPB-202ENST00000340729 CABP4P57796 275 aa23.76■■□□□ 1.39
CLPB-202ENST00000340729 RSRC2Q7L4I2 434 aaKnown RBP23.76■■□□□ 1.39
CLPB-202ENST00000340729 BAG1Q99933 345 aaPredicted RBP23.76■■□□□ 1.39
CLPB-202ENST00000340729 PRDM11Q9NQV5 511 aa23.76■■□□□ 1.39
CLPB-202ENST00000340729 MRFAP1Q9Y605 127 aa23.76■■□□□ 1.39
CLPB-202ENST00000340729 UBR2Q8IWV8 1755 aa23.76■■□□□ 1.39
CLPB-202ENST00000340729 ERICH4A6NGS2 130 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 TMEM232C9JQI7 657 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 TULP2O00295 520 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 CASQ1P31415 396 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 METAP2P50579 478 aaKnown RBP eCLIP23.75■■□□□ 1.39
CLPB-202ENST00000340729 TRDNQ13061 729 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 XAGE2Q96GT9 111 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 PUS3Q9BZE2 481 aaKnown RBP23.75■■□□□ 1.39
CLPB-202ENST00000340729 PUS7LQ9H0K6 701 aaKnown RBP23.75■■□□□ 1.39
CLPB-202ENST00000340729 HOOK1Q9UJC3 728 aaKnown RBP23.75■■□□□ 1.39
CLPB-202ENST00000340729 SH2B2O14492 632 aaPredicted RBP23.75■■□□□ 1.39
CLPB-202ENST00000340729 GPAA1O43292 621 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 CC2D1AQ6P1N0 951 aaPredicted RBP23.75■■□□□ 1.39
CLPB-202ENST00000340729 KCNH3Q9ULD8 1083 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 PCDHA5Q9Y5H7 936 aa23.75■■□□□ 1.39
CLPB-202ENST00000340729 TBC1D8O95759 1140 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 MDM2Q00987 491 aaPredicted RBP23.74■■□□□ 1.39
CLPB-202ENST00000340729 NT5DC1Q5TFE4 455 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 FOXP4Q8IVH2 680 aaPredicted RBP23.74■■□□□ 1.39
CLPB-202ENST00000340729 CNNM3Q8NE01 707 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 ZNF18P17022 549 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 LONRF3Q496Y0 759 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 JAKMIP3Q5VZ66 844 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 TTLL7Q6ZT98 887 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 RABGGTAQ92696 567 aa23.74■■□□□ 1.39
CLPB-202ENST00000340729 WDR17Q8IZU2 1322 aa23.73■■□□□ 1.39
CLPB-202ENST00000340729 STK36Q9NRP7 1315 aa23.73■■□□□ 1.39
CLPB-202ENST00000340729 SLC20A2Q08357 652 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms