RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FAM76AQ8TAV0 307 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 FTOQ9C0B1 505 aaKnown RBP eCLIP16.8■□□□□ 0.284e-13■■■□□ 15.5
RRP1B-201ENST00000340648 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
RRP1B-201ENST00000340648 TEX13AQ9BXU3 409 aaPredicted RBP16.8■□□□□ 0.28
RRP1B-201ENST00000340648 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
RRP1B-201ENST00000340648 MPHOSPH10O00566 681 aaKnown RBP16.79■□□□□ 0.28
RRP1B-201ENST00000340648 TLR7Q9NYK1 1049 aaKnown RBP16.79■□□□□ 0.28
RRP1B-201ENST00000340648 APPBP2Q92624 585 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 TTF2Q9UNY4 1162 aaKnown RBP16.79■□□□□ 0.28
RRP1B-201ENST00000340648 POSTNQ15063 836 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 MBD4O95243 580 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 TMEM87AQ8NBN3 555 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 AFAP1L1Q8TED9 768 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF652Q9Y2D9 606 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 AATKQ6ZMQ8 1374 aa16.79■□□□□ 0.28
RRP1B-201ENST00000340648 SPECC1LQ69YQ0 1117 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 PREX2Q70Z35 1606 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 PPP1R13BQ96KQ4 1090 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 GPR161Q8N6U8 529 aaKnown RBP16.78■□□□□ 0.28
RRP1B-201ENST00000340648 CDC25BP30305 580 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 ZSCAN26Q16670 478 aa16.78■□□□□ 0.28
RRP1B-201ENST00000340648 ZSCAN29Q8IWY8 852 aaPredicted RBP16.78■□□□□ 0.28
RRP1B-201ENST00000340648 TAF5LO75529 589 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 ARID5AQ03989 594 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 ZNF589Q86UQ0 364 aaPredicted RBP16.77■□□□□ 0.28
RRP1B-201ENST00000340648 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
RRP1B-201ENST00000340648 IFT81Q8WYA0 676 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 RABEP2Q9H5N1 569 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 KCNA6P17658 529 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
RRP1B-201ENST00000340648 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 PPP2R2CQ9Y2T4 447 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 NEURL1BA8MQ27 555 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 PLBD2Q8NHP8 589 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 FAM89AQ96GI7 184 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 KCNJ14Q9UNX9 436 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
RRP1B-201ENST00000340648 OTUD6BQ8N6M0 293 aa16.77■□□□□ 0.27
RRP1B-201ENST00000340648 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
RRP1B-201ENST00000340648 CYP26C1Q6V0L0 522 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 ZNF274Q96GC6 653 aaPredicted RBP16.76■□□□□ 0.27
RRP1B-201ENST00000340648 CDC5LQ99459 802 aaKnown RBP16.76■□□□□ 0.27
RRP1B-201ENST00000340648 ANKIB1Q9P2G1 1089 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 ANKRD62A6NC57 917 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
RRP1B-201ENST00000340648 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 CYP2E1P05181 493 aaPredicted RBP16.76■□□□□ 0.27
RRP1B-201ENST00000340648 DPCR1Q3MIW9 517 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 ADCY9O60503 1353 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 KDRP35968 1356 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 WWC2Q6AWC2 1192 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 CABLES1Q8TDN4 633 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 SPAG5Q96R06 1193 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 IQGAP3Q86VI3 1631 aa16.76■□□□□ 0.27
RRP1B-201ENST00000340648 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 DEXIO95424 95 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 ARID5BQ14865 1188 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 TAB2Q9NYJ8 693 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 GIGYF1O75420 1035 aaPredicted RBP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA8FQ08AF8 430 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 NCBP1Q09161 790 aaKnown RBP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 GOLGA8DPQ0D2H9 430 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 ZNF827Q17R98 1081 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 STAMQ92783 540 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 SERTAD1Q9UHV2 236 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 SEC31AO94979 1220 aaKnown RBP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 RBM5P52756 815 aaKnown RBP eCLIP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 CDC42BPAQ5VT25 1732 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 MAGEB6P1A0A0J9YX57 407 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 GCOM1H8Y6P7 765 aaPredicted RBP16.75■□□□□ 0.27
RRP1B-201ENST00000340648 MYZAPP0CAP1 466 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 KRT9P35527 623 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 VAV2P52735 878 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 PRM3Q9NNZ6 103 aa16.75■□□□□ 0.27
RRP1B-201ENST00000340648 GNAT2P19087 354 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 HSPD1P10809 573 aaKnown RBP16.74■□□□□ 0.27
RRP1B-201ENST00000340648 ZAP70P43403 619 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 TUBB2AQ13885 445 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 GDAP1L1Q96MZ0 367 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 TUBB2BQ9BVA1 445 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 CYP21A2P08686 494 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 SPTLC3Q9NUV7 552 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 GSTTP1A0A1W2PQM5 241 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
RRP1B-201ENST00000340648 PDIA3P30101 505 aaKnown RBP16.74■□□□□ 0.27
RRP1B-201ENST00000340648 CCDC152Q4G0S7 254 aa16.74■□□□□ 0.27
RRP1B-201ENST00000340648 CMA1P23946 247 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms