RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SREBF2Q12772 1141 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 DZIP1Q86YF9 867 aaKnown RBP16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 ERC1Q8IUD2 1116 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 CSRNP1Q96S65 589 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 ZIC5Q96T25 663 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 AKAP11Q9UKA4 1901 aa16.41■□□□□ 0.22
SIRPB3P-201ENST00000340424 IGSF3O75054 1194 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 CENPBP07199 599 aaPredicted RBP16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 PRKG1Q13976 671 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 HSP90AB4PQ58FF6 505 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 TNNI3KQ59H18 835 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 RPAP2Q8IXW5 612 aaPredicted RBP16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 FPGT-TNNI3KV9GXZ4 949 aa16.4■□□□□ 0.22
SIRPB3P-201ENST00000340424 HMMRO75330 724 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 DIXDC1Q155Q3 683 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 CCDC158Q5M9N0 1113 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 TMEM39BQ9GZU3 492 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 ABCF2Q9UG63 623 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 GAKO14976 1311 aa16.39■□□□□ 0.21
SIRPB3P-201ENST00000340424 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 TM4SF4P48230 202 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 INHBEP58166 350 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 SPRYD7Q5W111 196 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 ZNF512BQ96KM6 892 aaPredicted RBP16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 RNF186Q9NXI6 227 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 LAMB1P07942 1786 aa16.38■□□□□ 0.21
SIRPB3P-201ENST00000340424 MANSC4A6NHS7 340 aaPredicted RBP16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 MAP4K4O95819 1239 aaPredicted RBP16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 GSTO1P78417 241 aa16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 FAM151AQ8WW52 585 aa16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
SIRPB3P-201ENST00000340424 TRPA1O75762 1119 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 CACNB3P54284 484 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 TTC39AQ5SRH9 613 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 MYH2Q9UKX2 1941 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
SIRPB3P-201ENST00000340424 OTOFQ9HC10 1997 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 ALDH1A1P00352 501 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 LDHCP07864 332 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 MCAMP43121 646 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 CLMNQ96JQ2 1002 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 IDI2Q9BXS1 227 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 USP40Q9NVE5 1235 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 FZD1Q9UP38 647 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 CSADQ9Y600 493 aa16.35■□□□□ 0.21
SIRPB3P-201ENST00000340424 ENTPD3O75355 529 aa16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 MAP3K9P80192 1104 aa16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 MECOMQ03112 1051 aa16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 NOM1Q5C9Z4 860 aaKnown RBP16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 CFHR5Q9BXR6 569 aa16.34■□□□□ 0.21
SIRPB3P-201ENST00000340424 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 MKRN3Q13064 507 aaKnown RBP16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 NSUN4Q96CB9 384 aaKnown RBP16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 ZNF341Q9BYN7 854 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 RAI14Q9P0K7 980 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 LRP2BPQ9P2M1 347 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 DBNLQ9UJU6 430 aaKnown RBP16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 MAST2Q6P0Q8 1798 aa16.33■□□□□ 0.2
SIRPB3P-201ENST00000340424 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 BTDP43251 543 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 NFIAQ12857 509 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 VGLL4Q14135 290 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 OTUD7BQ6GQQ9 843 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 PI16Q6UXB8 463 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 EAF2Q96CJ1 260 aaPredicted RBP16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 FAM198AQ9UFP1 575 aa16.32■□□□□ 0.2
SIRPB3P-201ENST00000340424 TCP10Q12799 353 aa16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 CLASRPQ8N2M8 674 aaKnown RBP16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 OPTNQ96CV9 577 aa16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 WRNIP1Q96S55 665 aa16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
SIRPB3P-201ENST00000340424 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 SPDYE5A6NIY4 337 aa16.3■□□□□ 0.2
SIRPB3P-201ENST00000340424 PLCG2P16885 1265 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms