RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 UFL1O94874 794 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 CLEC17AQ6ZS10 378 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 UBR2Q8IWV8 1755 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 LTBP4Q8N2S1 1624 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 PLEKHG2Q9H7P9 1386 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 TAF1P21675 1872 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 CYP2D6P10635 497 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 EXOSC10Q01780 885 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 FAM84BQ96KN1 310 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 ZSWIM5Q9P217 1185 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 USP5P45974 858 aa11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 HMGN5P82970 282 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 SART3Q15020 963 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 ZRSR1Q15695 479 aaKnown RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 MB21D2Q8IYB1 491 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
RBFOX1-202ENST00000340209 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 DHX16O60231 1041 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 NR1I2O75469 434 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 WTAPQ15007 396 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 CCDC73Q6ZRK6 1079 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 KCNJ14Q9UNX9 436 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 NUP188Q5SRE5 1749 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 NUP98P52948 1817 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 SLIT2O94813 1529 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 GSG1L2A8MUP6 293 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 USP17L12C9JPN9 530 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 USP17L21D6R901 530 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 BIN1O00499 593 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF445P59923 1031 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 LRP6O75581 1613 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 IARSP41252 1262 aaKnown RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 TSGA10IPQ3SY00 556 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 FNBP4Q8N3X1 1017 aaPredicted RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 MCM9Q9NXL9 1143 aa11.87□□□□□ -0.51
RBFOX1-202ENST00000340209 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 NMT2O60551 498 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 AKAP17AQ02040 695 aaKnown RBP11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 CCAR1Q8IX12 1150 aaKnown RBP11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 CARMIL3Q8ND23 1372 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 APBA3O96018 575 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 CDC27P30260 824 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF622Q969S3 477 aaKnown RBP eCLIP11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 MECOMQ03112 1051 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 PPARAQ07869 468 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 MAP3K11Q16584 847 aa11.86□□□□□ -0.51
RBFOX1-202ENST00000340209 ESPNB1AK53 854 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 SERPINB2P05120 415 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 RESTQ13127 1097 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 SASS6Q6UVJ0 657 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 ST5P78524 1137 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 PICALMQ13492 652 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 DNTTIP2Q5QJE6 756 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 CFAP45Q9UL16 551 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 RFX7Q2KHR2 1363 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 TCRBV5S4A2TA0A5A2 114 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 KINO60870 393 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 FDPSP14324 419 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 LUZP1Q86V48 1076 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 NOL10Q9BSC4 688 aaKnown RBP11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 CLIC4Q9Y696 253 aa11.85□□□□□ -0.51
RBFOX1-202ENST00000340209 UBE4AQ14139 1066 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF396Q96N95 335 aaPredicted RBP11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 RTN1Q16799 776 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 DNAJC25Q9H1X3 360 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 TSPY2A6NKD2 308 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 USP17L8P0C7I0 530 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 PRR5LQ6MZQ0 368 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 DYNLL2Q96FJ2 89 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
RBFOX1-202ENST00000340209 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 CCDC192P0DO97 292 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 ANO6Q4KMQ2 910 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 GUCY1A2P33402 732 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
RBFOX1-202ENST00000340209 TGFBRAP1Q8WUH2 860 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms