RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CDC25BP30305 580 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 SCARF1Q14162 830 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 TSR1Q2NL82 804 aaKnown RBP16.2■□□□□ 0.18
PCDH8-201ENST00000338862 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 SMC1AQ14683 1233 aaKnown RBP16.2■□□□□ 0.18
PCDH8-201ENST00000338862 MTF1Q14872 753 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 AXDND1Q5T1B0 1012 aaPredicted RBP16.2■□□□□ 0.18
PCDH8-201ENST00000338862 SARM1Q6SZW1 724 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 CAPZA3Q96KX2 299 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 ST5P78524 1137 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 FILIP1LQ4L180 1135 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 NYAP1Q6ZVC0 841 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 WDR24Q96S15 920 aa16.2■□□□□ 0.18
PCDH8-201ENST00000338862 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
PCDH8-201ENST00000338862 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 ERCC3P19447 782 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 COL15A1P39059 1388 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
PCDH8-201ENST00000338862 CAPN2P17655 700 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
PCDH8-201ENST00000338862 ZMYM1Q5SVZ6 1142 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 VPS16Q9H269 839 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 IMPACTQ9P2X3 320 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 MATR3P43243 847 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDH8-201ENST00000338862 TOGARAM2Q6ZUX3 1019 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
PCDH8-201ENST00000338862 DSCC1Q9BVC3 393 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 LRP2BPQ9P2M1 347 aa16.19■□□□□ 0.18
PCDH8-201ENST00000338862 PRDM1O75626 825 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 ATF3P18847 181 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 PDE4CQ08493 712 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 ENGASEQ8NFI3 743 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 DRC1Q96MC2 740 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 UBAC1Q9BSL1 405 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 PRDM11Q9NQV5 511 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 RSPH14Q9UHP6 348 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 KIF23Q02241 960 aaPredicted RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 SART3Q15020 963 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 BRAPQ7Z569 592 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 DIS3L2Q8IYB7 885 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 N4BP3O15049 544 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 NR5A1Q13285 461 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 PDIA6Q15084 440 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 ZNF446Q9NWS9 450 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 GUCA1BQ9UMX6 200 aa16.18■□□□□ 0.18
PCDH8-201ENST00000338862 ANGEL1Q9UNK9 670 aaKnown RBP16.18■□□□□ 0.18
PCDH8-201ENST00000338862 KIF6Q6ZMV9 814 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 ILDR1Q86SU0 546 aaPredicted RBP16.17■□□□□ 0.18
PCDH8-201ENST00000338862 TRMT112Q9UI30 125 aaKnown RBP16.17■□□□□ 0.18
PCDH8-201ENST00000338862 SOWAHDA6NJG2 315 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 AKAP2Q9Y2D5 859 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 YEATS4O95619 227 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 BLZF1Q9H2G9 400 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
PCDH8-201ENST00000338862 CMA1P23946 247 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 IGSF22Q8N9C0 903 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 PLBD2Q8NHP8 589 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 KCNB2Q92953 911 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 DNAJC21Q5F1R6 531 aaKnown RBP16.16■□□□□ 0.18
PCDH8-201ENST00000338862 KRI1Q8N9T8 703 aaKnown RBP16.16■□□□□ 0.18
PCDH8-201ENST00000338862 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 SRRTQ9BXP5 876 aaKnown RBP16.16■□□□□ 0.18
PCDH8-201ENST00000338862 NPHP4O75161 1426 aaPredicted RBP16.16■□□□□ 0.18
PCDH8-201ENST00000338862 ZNF174Q15697 407 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 PARD6BQ9BYG5 372 aa16.16■□□□□ 0.18
PCDH8-201ENST00000338862 PREX1Q8TCU6 1659 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 ZMYND10O75800 440 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 CCDC175P0C221 793 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 RBM43Q6ZSC3 357 aaKnown RBP16.15■□□□□ 0.18
PCDH8-201ENST00000338862 ARHGEF25Q86VW2 580 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 ANKRD20A12PQ8NF67 263 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 MPHOSPH8Q99549 860 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 PHKG2P15735 406 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 IRX5P78411 483 aaPredicted RBP16.15■□□□□ 0.18
PCDH8-201ENST00000338862 GRIN1Q05586 938 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 MROH7-TTC4A0A0A0MT08 1334 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
PCDH8-201ENST00000338862 CHMP4BP1P59074 171 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 PDE11AQ9HCR9 933 aa16.15■□□□□ 0.18
PCDH8-201ENST00000338862 CWC15Q9P013 229 aaKnown RBP16.15■□□□□ 0.18
PCDH8-201ENST00000338862 ARHGAP6O43182 974 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 MBD4O95243 580 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 IPO7O95373 1038 aaKnown RBP16.14■□□□□ 0.17
PCDH8-201ENST00000338862 EXOSC10Q01780 885 aaKnown RBP16.14■□□□□ 0.17
PCDH8-201ENST00000338862 PDE4BQ07343 736 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 ENOX2Q16206 610 aaKnown RBP16.14■□□□□ 0.17
PCDH8-201ENST00000338862 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 SHC4Q6S5L8 630 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 APPBP2Q92624 585 aa16.14■□□□□ 0.17
PCDH8-201ENST00000338862 SUGCTQ9HAC7 445 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms