RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 FARP2O94887 1054 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 PAPLNO95428 1278 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 FKBP4Q02790 459 aaKnown RBP eCLIP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 SF3B2Q13435 895 aaKnown RBP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 PLCL1Q15111 1095 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 ZNF574Q6ZN55 896 aaPredicted RBP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 DDX54Q8TDD1 881 aaKnown RBP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
XRCC4-202ENST00000338635 DAGLAQ9Y4D2 1042 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 BIN1O00499 593 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 BNIP3Q12983 259 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 ZNF792Q3KQV3 632 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 STK11IPQ8N1F8 1099 aa5.55□□□□□ -1.52
XRCC4-202ENST00000338635 TMEM88BA6NKF7 163 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 AOC2O75106 756 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 CYP27C1Q4G0S4 372 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 ANO2Q9NQ90 1003 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 PPP1R9AQ9ULJ8 1098 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 MTMR7Q9Y216 660 aa5.54□□□□□ -1.52
XRCC4-202ENST00000338635 B3GALT4O96024 378 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 ABL1P00519 1130 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 PDE3AQ14432 1141 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 WFDC3Q8IUB2 231 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 WDR18Q9BV38 432 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 CARMIL2Q6F5E8 1435 aa5.53□□□□□ -1.52
XRCC4-202ENST00000338635 KIAA0319Q5VV43 1072 aa5.52□□□□□ -1.53
XRCC4-202ENST00000338635 USPL1Q5W0Q7 1092 aa5.52□□□□□ -1.53
XRCC4-202ENST00000338635 KSR1Q8IVT5 923 aa5.52□□□□□ -1.53
XRCC4-202ENST00000338635 MISP3Q96FF7 219 aa5.52□□□□□ -1.53
XRCC4-202ENST00000338635 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
XRCC4-202ENST00000338635 PHLDB3Q6NSJ2 640 aa5.51□□□□□ -1.53
XRCC4-202ENST00000338635 EHD4Q9H223 541 aa5.51□□□□□ -1.53
XRCC4-202ENST00000338635 ZNF576Q9H609 170 aa5.51□□□□□ -1.53
XRCC4-202ENST00000338635 SYNGAP1Q96PV0 1343 aa5.51□□□□□ -1.53
XRCC4-202ENST00000338635 FAM87AP0C7U9 286 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 CD8BP10966 210 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 LIG1P18858 919 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 CDK5R2Q13319 367 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 ZNF211Q13398 564 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-202ENST00000338635 ATG4DQ86TL0 474 aaPredicted RBP5.5□□□□□ -1.53
XRCC4-202ENST00000338635 PLD6Q8N2A8 252 aaKnown RBP5.5□□□□□ -1.53
XRCC4-202ENST00000338635 NETO1Q8TDF5 533 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 JAG2Q9Y219 1238 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 NEFLP07196 543 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 FUT4P22083 530 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 ITPKAP23677 461 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 AP3B2Q13367 1082 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 FAM181AQ8N9Y4 354 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 CRIM1Q9NZV1 1036 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 VAV3Q9UKW4 847 aa5.5□□□□□ -1.53
XRCC4-202ENST00000338635 ARID3CA6NKF2 412 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 TMPRSS2O15393 492 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 SLFN14P0C7P3 912 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 PI4K2BQ8TCG2 481 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 FAM168AQ92567 244 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 WDR89Q96FK6 387 aaPredicted RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 ZC3H12CQ9C0D7 883 aaKnown RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 CCDC86Q9H6F5 360 aaKnown RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 PIDD1Q9HB75 910 aa5.49□□□□□ -1.53
XRCC4-202ENST00000338635 RC3H2Q9HBD1 1191 aaKnown RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 MBNL3Q9NUK0 354 aaKnown RBP5.49□□□□□ -1.53
XRCC4-202ENST00000338635 PRKCQQ04759 706 aa5.48□□□□□ -1.53
XRCC4-202ENST00000338635 PTPN12Q05209 780 aaKnown RBP5.48□□□□□ -1.53
XRCC4-202ENST00000338635 FANCD2OSQ96PS1 177 aa5.48□□□□□ -1.53
XRCC4-202ENST00000338635 SLC38A3Q99624 504 aa5.48□□□□□ -1.53
XRCC4-202ENST00000338635 ATXN3LQ9H3M9 355 aa5.48□□□□□ -1.53
XRCC4-202ENST00000338635 BRPF3Q9ULD4 1205 aa5.48□□□□□ -1.53
XRCC4-202ENST00000338635 CARNS1A5YM72 827 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 CD96P40200 585 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 ZNF157P51786 506 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-202ENST00000338635 ID3Q02535 119 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 SMYD4Q8IYR2 804 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-202ENST00000338635 TMEM40Q8WWA1 233 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 DISC1Q9NRI5 854 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 ADAMTS6Q9UKP5 1117 aa5.47□□□□□ -1.53
XRCC4-202ENST00000338635 ZNF862O60290 1169 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 RNGTTO60942 597 aaKnown RBP5.46□□□□□ -1.53
XRCC4-202ENST00000338635 CPNE3O75131 537 aaKnown RBP5.46□□□□□ -1.53
XRCC4-202ENST00000338635 LEFTY1O75610 366 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 PPP1R15AO75807 674 aaPredicted RBP5.46□□□□□ -1.53
XRCC4-202ENST00000338635 ORC1Q13415 861 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 AOC3Q16853 763 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 RPS26P11Q5JNZ5 115 aaPredicted RBP5.46□□□□□ -1.53
XRCC4-202ENST00000338635 LRRN4CLQ8ND94 238 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 NPHS2Q9NP85 383 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 U3KQE9 123 aa5.46□□□□□ -1.53
XRCC4-202ENST00000338635 TMEM238LA0A1B0GVL6 79 aa5.46□□□□□ -1.54
XRCC4-202ENST00000338635 ICMTO60725 284 aa5.46□□□□□ -1.54
XRCC4-202ENST00000338635 IFI16Q16666 785 aaKnown RBP5.46□□□□□ -1.54
XRCC4-202ENST00000338635 ARHGAP27Q6ZUM4 889 aa5.46□□□□□ -1.54
XRCC4-202ENST00000338635 ABCB6Q9NP58 842 aa5.46□□□□□ -1.54
XRCC4-202ENST00000338635 PCOLCE2Q9UKZ9 415 aa5.46□□□□□ -1.54
XRCC4-202ENST00000338635 FAAP100Q0VG06 881 aa5.45□□□□□ -1.54
XRCC4-202ENST00000338635 TTLL4Q14679 1199 aa5.45□□□□□ -1.54
XRCC4-202ENST00000338635 KIF4BQ2VIQ3 1234 aa5.45□□□□□ -1.54
XRCC4-202ENST00000338635 HRASLS5Q96KN8 279 aa5.45□□□□□ -1.54
XRCC4-202ENST00000338635 MKNK2Q9HBH9 465 aa5.45□□□□□ -1.54
XRCC4-202ENST00000338635 TMEM265A0A087WTH1 108 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms